Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2930 ATGACGATCACTGTTCCCAGTCGGCAGCTGTTCATAAATGGCGAGTGGAAAGACCCGATCCTCAGGAAACGAATTCCTATCATCAATCCCTCGACTGAACTCAAAATTGGAGATATTCCAGCTGCTACTGCGGAGGATGTGGAGCTTGCAGTGGCTGCTGCTCGGAGAGCACTTGTCTGGAACAAGGGTAAAAATTGGGCAACAGCTCCTGGGTCTGTTCGTGCTCGGTATTTGCGAGCTATCGCTGCTAAGATAATAGAAAGGAAGTCTGAACTGGCAAAACTTGAAGCAATTGATTGCGGAAAACCACTGGACGAAGCATTGTGGGACATGGACGATGTTGCTGGTTGCTTTGAGTACTATGCTGACCTTGCTGAAGGATTGGATGCAAAGCAAAAGGCTCCCATATCTCTTCCCATGCAAACCTTCAAAAGTCATGTTCTTAGGGAGCCCATTGGAGTTGTTGCATTGATTACACCGTGGAACTATCCTCTATTGATGGCTGTGTGGAAAGTTGCTCCTGCTTTGGCTGCTGGTTGTACTGCAATATTGAAGCCATCTGAATTGGCATCTTTGACCTGTTTGGAGCTGGGTCAAATATGTAGAGATGTTGGCCTTCCTCCAGGCGTCTTAAATATTCTAACTGGATTAGGCCCCGAAGCTGGTGCCCCTTTGGCATCACATCCTCATGTAGACAAGATTGCCTTTACTGGAAGCTCCATGACTGGGAGCAAGATTATGACAGCTGCAGCTCAACTGATCAAGCCTGTTTCACTAGAGCTTGGTGGGAAAAGCCCAATTGCTGTTTTTGAGGATGTTGACCTTGATAAAGCTGTTGAATGGACCATGTTTGGCTGTTTCTGGACAAATGGTCAGATTTGCGCTGCCACTACCCGTCTTATTATACATGAAAGCATAGCTGAACAATTTTTGAATAGGCTTGTGAAATGGATTAAAAACATCAAGATATCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGTCCAGTTGTTAGTAAAGGGCAGTATGAAAAAATATTGAAGTTCATCTCAACTGCCAAGAGCGAGGGGGCAACAATTTTGACTGGTGGATCTCGCCCTAGGCATTTAAACAAGGGTTTTTTTATTGAACCAACTGTTGTTACTGATGTAACTACCTCTATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTCTCTGTGTAAAAACATTTAATACTGAGGAAGAAGCTATTAAACTAGCAAATGATACCCAATATGGCTTAGCTGCTGCTGTGATATCAAATGATCTAGAAAGATGTGAACGCTTAACTAAGGCTTTTCAGGTGGGAATTGTATGGATCAATTGCTCCCAACCGTGCTTTACTCAAGCCCCATGGGGAGGCATTAAACGTAGTGGTTTTGGTCGTGAATTAGGAGAATGGGGGCTTGAAAACTACTTGAGTGTAAAGCAAGTGACTCAATACATATCAGATGAACCTTGGGGGTGGTACCAGTTTCCTTCAAAGCTGTGA 1512 0.4425 MTITVPSRQLFINGEWKDPILRKRIPIINPSTELKIGDIPAATAEDVELAVAAARRALVWNKGKNWATAPGSVRARYLRAIAAKIIERKSELAKLEAIDCGKPLDEALWDMDDVAGCFEYYADLAEGLDAKQKAPISLPMQTFKSHVLREPIGVVALITPWNYPLLMAVWKVAPALAAGCTAILKPSELASLTCLELGQICRDVGLPPGVLNILTGLGPEAGAPLASHPHVDKIAFTGSSMTGSKIMTAAAQLIKPVSLELGGKSPIAVFEDVDLDKAVEWTMFGCFWTNGQICAATTRLIIHESIAEQFLNRLVKWIKNIKISDPLEEGCRLGPVVSKGQYEKILKFISTAKSEGATILTGGSRPRHLNKGFFIEPTVVTDVTTSMQIWREEVFGPVLCVKTFNTEEEAIKLANDTQYGLAAAVISNDLERCERLTKAFQVGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYQFPSKL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2930 503 SUPERFAMILY ALDH-like 4 490 IPR016161 GO:0016491
Prci4g2930 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Prci4g2930 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Prci4g2930 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Prci4g2930 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Prci4g2930 503 CDD ALDH_F10_BADH 27 487 - -
Prci4g2930 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 279 - -
Prci4g2930 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Prci4g2930 503 PANTHER ALDEHYDE DEHYDROGENASE 5 502 - -
Prci4g2930 503 Pfam Aldehyde dehydrogenase family 23 485 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2930 Prci-Chr4 41094678 41099899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2930 1 503 Aldehyde Dehydrogenase Gene Family AT3G48170 80.318 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2930 K00130 - gmx:100170731 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2930 4 41094678 41099899 Prci9g1623 9 28714526 28719961 CCT
Prci4g2930 4 41094678 41099899 Prci4g2930 4 41094678 41099899 ECH