Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2918 ATGAAACAGGCCTGTGAGAAGGAGATTCTTACTTCTGAATCAAGAAATTTGCAGCTGCGATTTGAGAGCAATATCTCTCCTCCCATTTTTACAGGAGCTCGAATTGAAGGGGAAGATGGCTCCAATTTAAGGATAAGTTTAGTTGATGTCCTGACTGGACAGGTTGTTAGTTCAGGACCTGAATCTGCAGCTAAGGTGGAAATTGTAGTACTTGAGGGTGATTTTGAAGACAGAAGTGATATTTGGACGCCTGAAGAGTTTAGGAGCAACATTGTAAAAGAGAGAGATGGAAAAAAGCCTCTTCTCACTGGAGATGTATTTTTGTATCTTAAAGATGGGATTGGTGTGGTGGGTGAAGTTTCATTTACAGATAATTCAAGCTGGACAAGGAGCAGGAAGTTCAGGCTAGGAGCTAGAGCTGTAAATAACTTTGATGGATTTAGTATTAAAGAAGCAAAGACAGACTCATTTATTGTCAGAGATCACCGAGGGGAATTGTACAAGAAACACCACCCTCCTAGTCTGTCTGATGAAGTCTGGAGATTAGAAAAGATTGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCAGGAAAAGATCGATACTGTGAAAGATTTTCTCACACAGCTCAACTTAGACTCAGCAAAGCTTCGCAGTATCTTGGGTACAGGTATGTCCACGAAAATGTGGGAAGCAACAGTGGAGCACGCTCAAACATGTGTGCTTGATACGCGGAGGTTTCTGTACTTCCCTTCTCATTCCCAACCAAAATCTGGTGTTGTCTTCAATGCTGTTGGACAAGTGACGGGACTGCTCTCTGAAAGTCAGTTTGTCCCTGTTGATAAGCTGTCTGAAACTGAAAAGGCCGATGCTCAAAGCTCAGTACTTTATGCAATTCAACAAAGGGAGAAATTTGACTCTTTCAATGATGGAGCCTCTCTGATGGAGGACAACTTACTTTTCCCGTCATGCTCACCCAATTCAGATGGATATAGTGCCAGCAAGATTTTGTCTCCTCAAAAGACTGATCGATTTGATTACTTCCAGGGGAGTGCCCCCTCTCCGGATATATTGTCATCCGTGTACTCTGTTGGAGCTAGTGACTTGGATGAATATTGCTTGCCCATCAGTGACGGCATGAATTTCAGATATGACCAAACACTAGGTTTTCCAGTCCAAACTTCTAATTCTTTCATTGGTGAAACAGATACTGTGTCTCATGTTTTCGATGATCATGCCCATCTTCATTTCCTTGATGCTGATATTCAGTCTCCAATCCATAAGCCGGATAAGAGTGCTGTTGATGGCAAAGCACAAAAGAGATGGAGAATGCTATTCAATGTCGTAAAATGGCTCCTGTTGAGGAAAAAGAAGACATGA 1380 0.4239 MKQACEKEILTSESRNLQLRFESNISPPIFTGARIEGEDGSNLRISLVDVLTGQVVSSGPESAAKVEIVVLEGDFEDRSDIWTPEEFRSNIVKERDGKKPLLTGDVFLYLKDGIGVVGEVSFTDNSSWTRSRKFRLGARAVNNFDGFSIKEAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSQEKIDTVKDFLTQLNLDSAKLRSILGTGMSTKMWEATVEHAQTCVLDTRRFLYFPSHSQPKSGVVFNAVGQVTGLLSESQFVPVDKLSETEKADAQSSVLYAIQQREKFDSFNDGASLMEDNLLFPSCSPNSDGYSASKILSPQKTDRFDYFQGSAPSPDILSSVYSVGASDLDEYCLPISDGMNFRYDQTLGFPVQTSNSFIGETDTVSHVFDDHAHLHFLDADIQSPIHKPDKSAVDGKAQKRWRMLFNVVKWLLLRKKKT 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2918 459 Pfam Calmodulin binding protein C-terminal domain 248 304 IPR046829 -
Prci4g2918 459 PANTHER OS02G0177800 PROTEIN 12 332 IPR012416 GO:0005516
Prci4g2918 459 Pfam Calmodulin binding protein-like N-terminal domain 17 162 IPR046831 -
Prci4g2918 459 Pfam Calmodulin binding protein central domain 174 240 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2918 Prci-Chr4 40977279 40993485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2918 1 297 Calmodulin-binding Proteins AT5G62570 62.290 3.32e-132 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2918 - - gmx:100804548 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2918 4 40977279 40993485 Prci4g2918 4 40977279 40993485 ECH