Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2916 ATGCCGCATGTTTTTCGATTTGGATGCTCACAACCGTCGCCACCGCATAGCCTTGCGCCTTTTGCTCAAGCTTCGGCGATGTCGCAGAAGAGACGCCCCGAAGATGGCAAGGCTAAACCAGAAAGTAGCAGTCCGGAGGATAAGCGCAGAAAGGTTCCCGCCCTTACCAGTGTGGTGCATGAGGCGATGAGATTACACTCTTTCCGGAATTTGTTGGAGCCGATTCTAGAGCCCTTGCTTCGTCGAGTGGTTAAGGAGGAAGTTGAATCGGCTCTTAGGAGGCATTTAATAAGCATGAAACAGGCCTGTGAGAAGGAGATTCTTACTTCTGAATCAAGAAATTTGCAGCTGCGATTTGAGAGCAATATCTCTCCTCCCATTTTTACAGGAGCTCGAATTGAAGGGGAAGATGGCTCCAATTTAAGGATAAGTTTAGTTGATGTCCTGACTGGACAGGTTGTTAGTTCAGGACCTGAATCTGCAGCTAAGGTGGAAATTGTAGTACTTGAGGGTGATTTTGAAGACAGAAGTGATATTTGGACGCCTGAAGAGTTTAGGAGCAACATTGTAAAAGAGAGAGATGGAAAAAAGCCTCTTCTCACTGGAGATGTATTTTTGTATCTTAAAGATGGGATTGGTGTGGTGGGTGAAGTTTCATTTACAGATAATTCAAGCTGGACAAGGAGCAGGAAGTTCAGGCTAGGAGCTAGAGCTGTAAATAACTTTGATGGATTTAGTATTAAAGAAGCAAAGACAGACTCATTTATTGTCAGAGATCACCGAGGGGAATTGTACAAGAAACACCACCCTCCTAGTCTGTCTGATGAAGTCTGGAGATTAGAAAAGATTGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCAGGAAAAGATCGATACTGTGAAAGATTTTCTCACACAGCTCAACTTAGACTCAGCAAAGCTTCGCAGTATCTTGGGTACAGGTATGTCCACGAAAATGTGGGAAGCAACAGTGGAGCACGCTCAAACATGTGTGCTTGATACGCGGAGGTTTCTGTACTTCCCTTCTCATTCCCAACCAAAATCTGGTGTTGTCTTCAATGCTGTTGGACAAGTGACGGGACTGCTCTCTGAAAGTCAGTTTGTCCCTGTTGATAAGCTGTCTGAAACTGAAAAGGCCGATGCTCAAAGCTCAGTACTTTATGCAATTCAACAAAGGGAGAAATTTGACTCTTTCAATGATGGAGCCTCTCTGATGGAGGACAACTTACTTTTCCCGTCATGCTCACCCAATTCAGATGGATATAGTGCCAGCAAGATTTTGTCTCCTCAAAAGACTGATCGATTTGATTACTTCCAGGGGAGTGCCCCCTCTCCGGATATATTGTCATCCGTGTACTCTGTTGGAGCTAGTGACTTGGATGAATATTGCTTGCCCATCAGTGACGGCATGAATTTCAGATATGACCAAACACTAGGTTTTCCAGTCCAAACTTCTAATTCTTTCATTGGTGAAACAGATACTGTGTCTCATGTTTTCGATGATCATGCCCATCTTCATTTCCTTGATGCTGATATTCAGTCTCCAATCCATAAGCCGGATAAGAGTGCTGTTGATGGCAAAGCACAAAAGAGATGGAGAATGCTATTCAATGTCGTAAAATGGCTCCTGTTGAGGAAAAAGAAGACATGA 1674 0.4409 MPHVFRFGCSQPSPPHSLAPFAQASAMSQKRRPEDGKAKPESSSPEDKRRKVPALTSVVHEAMRLHSFRNLLEPILEPLLRRVVKEEVESALRRHLISMKQACEKEILTSESRNLQLRFESNISPPIFTGARIEGEDGSNLRISLVDVLTGQVVSSGPESAAKVEIVVLEGDFEDRSDIWTPEEFRSNIVKERDGKKPLLTGDVFLYLKDGIGVVGEVSFTDNSSWTRSRKFRLGARAVNNFDGFSIKEAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSQEKIDTVKDFLTQLNLDSAKLRSILGTGMSTKMWEATVEHAQTCVLDTRRFLYFPSHSQPKSGVVFNAVGQVTGLLSESQFVPVDKLSETEKADAQSSVLYAIQQREKFDSFNDGASLMEDNLLFPSCSPNSDGYSASKILSPQKTDRFDYFQGSAPSPDILSSVYSVGASDLDEYCLPISDGMNFRYDQTLGFPVQTSNSFIGETDTVSHVFDDHAHLHFLDADIQSPIHKPDKSAVDGKAQKRWRMLFNVVKWLLLRKKKT 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2916 557 MobiDBLite consensus disorder prediction 1 53 - -
Prci4g2916 557 MobiDBLite consensus disorder prediction 30 53 - -
Prci4g2916 557 PANTHER OS02G0177800 PROTEIN 29 429 IPR012416 GO:0005516
Prci4g2916 557 Pfam Calmodulin binding protein central domain 272 338 IPR046830 -
Prci4g2916 557 Pfam Calmodulin binding protein C-terminal domain 346 402 IPR046829 -
Prci4g2916 557 Pfam Calmodulin binding protein-like N-terminal domain 115 260 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2916 Prci-Chr4 40977279 40994877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2916 27 395 Calmodulin-binding Proteins AT5G62570 61.247 1.27e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2916 - - gmx:100793156 713.761