Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2905 ATGCATGGGCGTGGAGGTGAGGAGAGGAAAAAAACTCGGCACATGTGGACAAGCCCCACTCGTGGCCACCCGATTGTAAGCGCTGCCCCCGATGTTTCTTCTCCATCTTCGCCTTCAGTTAATTCATTCTATAAGGACTCTCGTAAAATTAGTGTTGGTGACTGTGCTCTCTTCAAGCCACCTCAGAAGTGTCCACCTTTTATTGGAATAATTCGTTCACTGACAGTTGGCAAAGAGGGTAAATTGAAGATACTTGTCAATTGGCTTTATCGGTCTGCTGAAGTGAACCTTGGCAAAGGTTTCCTACTGGAGACTGTGCCAAACGAAGTTTTCTACTCCTTTCATAAGGATGAGATTCCTGCTGCATCACTTCTGCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGTGTTGAACTTCCATCAGGGACTTCGTCATTTGTGTGTAGGAGGGTTTATGACATTGCGAACAATTGTTTATGGTGGTTAACTGACCAAGATTATATTAATGTACTTCAAGAAGAAGTAGATCAGCTGTTGTATAGGACTCGTATAGAAATGCATGCTACAGTACAACCAGGTGGTCGATCTCCCAAGCCAATGAGTAGTCCAACGTCATCACAGTTAAAATCAGGTTCAGATAGTGTCCAGAATAGTGCTTCTTCTTTTCCTTCTCAAGTTAAGGGCAGGAAAAGGGAGAGGGCAGATCAAGGGCCTGAGTCTGCCAAGCGAGAACGTGTGACAAAAGTTGAGGATGGAGACTCTGGTCATTCTAGACAGGAAAACATTTTGAAGACAGAGATTGCAAAAATTACAGAAAAGGGAGGGCTTGTTAATGCTGAAGGGGTTGAGAAGTTAGTGCAGCTTATGGTTCCTGATAGAAATGTGAAAAAGATAGATTTGGCTAGCCGGTCAATGCTTGCTGCTGTTATTGCAGCAACAGATAAGTTGGATTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTTTGCCAGTGTATGATGAATGGCTTCAAGAGGCCCATAAAGGGAAGATTGGTGACGGAAATGGGTCTAAGGACAGTGATAAATCTGTTGAAGAATTTCTTTTGGTATTACTCCGGGCACTTGATAAGCTTCCTGTAAATCTCCAAGCTCTACAGACATGTAACATTGGCAAATCTGTGAATCATTTGCGGACTCATAAAAACTCAGAAATCCAGAAGAAAGCTAGGGGATTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATTAATGATGCAAAAGCTGGTTCTGGTCAAACTGTCCCCTGGCCTACTAGAGCACGCCTTTCTGAAGTTGGCCAGGGTGGGAATAAAAATTCAGGTGGGTCATCTGATGTTGCTGTGAAGAGCTCGGTTACACAGCTTTCTGCATCCAGAACTTCTTCTGTGAAGATTACCCAGGGAGAGACTGCTGCCAGATCTGCATCTCCTGGGTCTATGAAGTCGGTGCCCTCACCAACCTCAGCAACTATGAACTCAAAAGACGGACAGCCCCGTGCTGCTGCCCTTAGTGGAGTTTCTGATCTTCCTATGGCAAATGCAAGGGATGAGAAAAGTAGTAGTTCTAGTCAATCTCATAATAACAGTCAATCTTGTTCCAGTGACCATGCTAAAACTGGGGGTTTTTCGGCAAAGGAGGATGCTAGGAGCTCTACTGCTATGAGTGTGAATAAAATATCAGGCAGTTCTTCACGGCACCGAAAGTCTGTTAATGGAATCTCAGGTAGTACAACTCCATCTGGAGGGCAAAGGGAGTCTGGTCGAAATTCCTCTGTACACAAAAATTCATCTTCGGAGAAATTGTCGCAATCTGGATTAACAGAGAAGGTGCATGATGGGACTTCACTTGAGGGGAGTGCTCCCAAGCTGATTGTTAAGATTCCAAACAGAGGCCGAAGTCCTGCAGAGAGTGCAAGTGGAGGTTCTTTTGATGATCCTTCAATCACAAACAGTCGAGCTTCATCTCCTGTTTTCTCAGAGAAGAATGATCAGTATGATCATAGTTCAAAGGAAAAGATTGATTTTTATCGAGCTAATACTGGTGCAGATGTTAATACTGAATCCTGGCAGAGTAATGATTTTAAAGATGTACTAACAGCATCTGATGAAGGCAATGGGTCACCTGCTACTGTTACTGATGAAGAGCGCTGTAGGACTGTTGGCAATTCTAAGAAGTTGGAAGCATCGAAAGCCACTTCATCATCATCTGGAAATGAAAATAAGGCAGTGAATATTCAGGATTTCAGCTCCATAAATGCCTTAATAGAAAGTTGTGTAAAGTATTCTGAAGCTAATGCTTCTTTGTCTGCTGTTGATGATGTTGGAATGAAGCTTCTTGCCAGTGTAGCGGCCGGAGAGATTTCCAAATCTGAATTGGCAACACCTGCTGGATCACCTGAAATAAACACCATTACGGTTGAGCAGTCATGTCCAGGTAACACCATGGAGTGTGAAGGAAATCTTGTTCAAAATGAATGTCATGCAAACACTGGCATTGATGAACATAAGAAGCAGGATACTGTCTCTGGTGATTCACACGCTAATAATGATAATGATTCTGGTTTGTTGGCATCTGAAACGAAGGTTCCTGAGGAGCAAAATAGGCATATCACTTCATCTAGTATGGATTTGCAGCAGGTTACGGAAGCCTGTCCAGAAAGCAAAGAAGAATCAAGTGAAATCCCAATTGCCGCTTCATTGCCTGGCTTTCCTGAAAGCACGGTGCAAGAAACCAGAGGTAGTGAATGTAGCAAACAGCTCAAGGAGAACAAAAATGTTGAGATTGCTAATGCAGGTGGAAATCTTGATGTTAAAGTTAATGAGGTTGCAAGAGTTGAGGTGGGTGCTGTTGACAAATTGACGCCACATCCCTCTGTGGAGGTTGATGCGAAGGGTGATAATTGTATAGTTGAGGAATCAAGCAGTGGTGAACAGACTACTCAAAAGGTTCCCGTGGTTGTTATGCAGGATTCAATGAAAGGAACAGATGAGAATGTGCTACATCCTTCTGATGATAGTGTTGGTAAGGCTGCAGAAAACCACAGTGAAAGAGAATGCAGAAAGGCTGCTGATGTGGCTGCTCGAAGTCATGCAGGTTGGTCTGAAATCCAAAGAAATGAGTGTGAAAATGATGCTGTGACAATGCCTGAGAACAGGAGTACAGCTGGTTTTGGTTCTGGTGACACTGGTCTTGCTTCTGAGTATGTAGAGGAGAATTCAGAAACAAAGGAGGCTCATGACCAGTATGCTGGACAGAATCTGCCAAGAGCTTCCCTGAGCTTGGCTTCACAAGAAATGGGGCAGCTTCCAGGTTCTAAAGGATCTAAATTGACTGCCATGGAAACTGAGGAAGCTGAAGAGTGCACCTCTGCCACTGCAGATGCCTCTTCCATGTCAGCCGCTGGTGTGTCTGATGTTGTAGATGCAAAAGTTGAGTTCGATTTAAATGAGGGCTTCAGTGCAGATGATGGAAAATCTGGAGAGTTCAATAGCATTGCTGTGCCTGTATGTGCACCTGCTGTACGAGTGATCAGTCCGGTGCCTTTTCCTGCTTCAACCATGTCTAGTGGTATTGCTGCTTCAATAACTATGGCTGCTGCAAAGGGGCCCTTTGTGCCGCCTGAAGGGGAGCTTGGTTGGAAGGGATCAGGTCCCACCAGTGCATTCCGGCCTGCAGAGCCCAGAAAAATTGTGGAAATGCCTCTTGGTACACCATCAGTTGCTCCTATATCTGATGTTCCAGGTGGAAAGCAGAGCCGACAACCATTAGATATTGACTTGAATGTGCCTGATGAAAGGATGCTTGATGATATAGCCTCTCAAGCTAGTTCTTGTCGGCTAAAAGATGGGATTTCCCCTGTTTGCTGCTCTGGAGGTCTTGGTCTTGACTTAAACCAGGTAGATGAAGCTTCAGATGTGGGCAATTACTCCACAAGCAATGGCCATAAAATGGATGTACAATTTCTGCAGGTGAAACCATCATCCAATGCTCATCCAAATAGAGAGGCTAGTGCGCTTAGGGACTTTGATTTGAATGATGGACCTGCTGTTGACGAAGTCATCACAGAACCAACATTGTTCACTCACCATGCCAGAAGCAGTGTGCCATCACAGCCCCCTGTATCTGGACCTAGAACAAGTAGTACTGAACTGGGGAGTTTCTCATCATGGTTTCCTTCAACTGGGAACACCTATTCAGCTGTCACAATATCGTCAATTATGCCTGATAGAGGGGATCAGCCCTTCTCAATTGTTGCACCTAATGGGCCACAGAGAATGCTGGGTCCTGCTACGGCTACCGGTGGCAGCCCATTTGGACCTGATGTTTATAGGGGACCAGTGCTTTCATCTTCTGCAATGCCATATCCATCTGCGCCATATCAGTATCCTATCTTCCCTTTTAATTCCAGCTTCCCTCTTCCATCGTCATCATTTTCAGGTGGATCAACTACTTATGTAGATTCAGCATCTGGTGGAAGGCTTTTCTTTCCTACAGTAAATTCACAGTTAATTGGACCTGCCAGTACAGTTTCATCTCATTACACCACCAGGCCTTATGTCTTTAGCCTTCCTGATGGTAGTGGTAATGCTGATGTCAAGAAATGGAGAGGGCAGGGTTTAGACCTTAATGCTGGGCCTGGAGGTCCAGACTTGGAGGCCAGAGATGAGACCTCAGCTCTTTTGCCAAGGCAACTTCCTGTTGCCAGTTCACAGGCGCTAGCTGAGGAGCAGGCGAGGATGTTCCAGCTGGCTGGTGGTGTTCTCAAGAGGAAGGAACCAGATGGTGGATGGGATAGCTACAAGCAATCCTCATGGCAATAG 4845 0.4495 MHGRGGEERKKTRHMWTSPTRGHPIVSAAPDVSSPSSPSVNSFYKDSRKISVGDCALFKPPQKCPPFIGIIRSLTVGKEGKLKILVNWLYRSAEVNLGKGFLLETVPNEVFYSFHKDEIPAASLLHPCKVAFLPKGVELPSGTSSFVCRRVYDIANNCLWWLTDQDYINVLQEEVDQLLYRTRIEMHATVQPGGRSPKPMSSPTSSQLKSGSDSVQNSASSFPSQVKGRKRERADQGPESAKRERVTKVEDGDSGHSRQENILKTEIAKITEKGGLVNAEGVEKLVQLMVPDRNVKKIDLASRSMLAAVIAATDKLDCLSQFVQLKGLPVYDEWLQEAHKGKIGDGNGSKDSDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMNINDAKAGSGQTVPWPTRARLSEVGQGGNKNSGGSSDVAVKSSVTQLSASRTSSVKITQGETAARSASPGSMKSVPSPTSATMNSKDGQPRAAALSGVSDLPMANARDEKSSSSSQSHNNSQSCSSDHAKTGGFSAKEDARSSTAMSVNKISGSSSRHRKSVNGISGSTTPSGGQRESGRNSSVHKNSSSEKLSQSGLTEKVHDGTSLEGSAPKLIVKIPNRGRSPAESASGGSFDDPSITNSRASSPVFSEKNDQYDHSSKEKIDFYRANTGADVNTESWQSNDFKDVLTASDEGNGSPATVTDEERCRTVGNSKKLEASKATSSSSGNENKAVNIQDFSSINALIESCVKYSEANASLSAVDDVGMKLLASVAAGEISKSELATPAGSPEINTITVEQSCPGNTMECEGNLVQNECHANTGIDEHKKQDTVSGDSHANNDNDSGLLASETKVPEEQNRHITSSSMDLQQVTEACPESKEESSEIPIAASLPGFPESTVQETRGSECSKQLKENKNVEIANAGGNLDVKVNEVARVEVGAVDKLTPHPSVEVDAKGDNCIVEESSSGEQTTQKVPVVVMQDSMKGTDENVLHPSDDSVGKAAENHSERECRKAADVAARSHAGWSEIQRNECENDAVTMPENRSTAGFGSGDTGLASEYVEENSETKEAHDQYAGQNLPRASLSLASQEMGQLPGSKGSKLTAMETEEAEECTSATADASSMSAAGVSDVVDAKVEFDLNEGFSADDGKSGEFNSIAVPVCAPAVRVISPVPFPASTMSSGIAASITMAAAKGPFVPPEGELGWKGSGPTSAFRPAEPRKIVEMPLGTPSVAPISDVPGGKQSRQPLDIDLNVPDERMLDDIASQASSCRLKDGISPVCCSGGLGLDLNQVDEASDVGNYSTSNGHKMDVQFLQVKPSSNAHPNREASALRDFDLNDGPAVDEVITEPTLFTHHARSSVPSQPPVSGPRTSSTELGSFSSWFPSTGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRMLGPATATGGSPFGPDVYRGPVLSSSAMPYPSAPYQYPIFPFNSSFPLPSSSFSGGSTTYVDSASGGRLFFPTVNSQLIGPASTVSSHYTTRPYVFSLPDGSGNADVKKWRGQGLDLNAGPGGPDLEARDETSALLPRQLPVASSQALAEEQARMFQLAGGVLKRKEPDGGWDSYKQSSWQ 1614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2905 1614 Gene3D - 35 278 IPR043151 -
Prci4g2905 1614 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 317 426 IPR035441 -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 1 15 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 1 39 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 195 225 - -
Prci4g2905 1614 ProSiteProfiles BAH domain profile. 48 163 IPR001025 GO:0003682
Prci4g2905 1614 MobiDBLite consensus disorder prediction 1005 1024 - -
Prci4g2905 1614 SMART TFS2_5 335 414 IPR003617 GO:0005634
Prci4g2905 1614 CDD TFIIS_I 337 413 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 440 505 - -
Prci4g2905 1614 ProSiteProfiles TFIIS N-terminal domain profile. 329 415 IPR017923 -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 1003 1024 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 706 748 - -
Prci4g2905 1614 Pfam TFIIS helical bundle-like domain 363 412 IPR017923 -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 842 922 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 226 260 - -
Prci4g2905 1614 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1614 - -
Prci4g2905 1614 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 279 416 IPR035441 -
Prci4g2905 1614 Pfam BAH domain 49 153 IPR001025 GO:0003682
Prci4g2905 1614 MobiDBLite consensus disorder prediction 648 670 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 1370 1391 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 553 618 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 875 893 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 733 748 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 189 260 - -
Prci4g2905 1614 SMART BAH_4 48 163 IPR001025 GO:0003682
Prci4g2905 1614 MobiDBLite consensus disorder prediction 522 546 - -
Prci4g2905 1614 MobiDBLite consensus disorder prediction 438 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2905 Prci-Chr4 40901942 40909778 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Prci4g2905 BAH 4.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2905 - - ccaj:109810746 1992.62