Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2892 ATGGTGGCTACGTCTTGCACAAATTTGTTGGACTTGGTGTCTGGGGACATTTTAAATTACCCTCAAACTCCCAGAGCTCTTCCGCGTGTTAATACTGTTCCAGGAGTTATTTCTGATATAGATGGGAAAGAAAGTACTGGTGATGATAACTCACATGCTTCCTCATCTGAACATAGTCAAAAGATAATTGTTGTATCAAATTTTCTTCCCCTTAATGCTCAAAAGGATAAAGATTCAGGCAGATGGTGCTTTAGTTATGATGAAGATTCAGTTTTGTGGCAGCTAAAAGATGCTATTTCTTATGATACTGATGTTGTTTATGTGGGATCTTTGAAGGTCGATGTTGATGAAAGTGAACAAGAGAAAATTTCTCAAGAGTTGCTGGATGAATTCAAATGCTGGCCTACCTTCCTGCCATCGCTCATTCAGAATAAGTTTTATAATGGATTTTGCAAGCAACATTTGTGGCCTCTATTTCATTACATGTTACCCATGTTTCCTGATCATGGCAATCGCTTTGATAGGTTGCTTTGGCAGGCCTATGTTGCTGCTAACAGGATATTTGCGAGAAGGGTTTTGGAGGTTATGAATCCAGAAGTTGATTATGTATGGGTTCATGATTATCATCTAATGGTTCTGCCAACATTTCTTCGAAAAGGATACAATAAAGTCAAGCTAGGATTTTTCCTCCACAGCCCTTTTCCTTCATCAGAAATTTTTCGGATTCTGCCTGTCAGAGATGAAATTTTGAAAGCACTTCTCAATGCAGATTTAATTGGGTTTCATACATTTGATTATGCTCGTCATTTTTTATCTTGTTGTAGTCGAATGCTTGGCTTGGAATATGAATCCAAAAGGGGCTACATTGGGCTTGAATACTTTGGCCGCACAATATACATTAAAATCTTGCCAGTAGGGATTCACATGGCTAGGCTTCACTCTGCCATAAATCACCCATCATCTTCTGTCAAAGTTCAAGAACTGTGTGAGCAATTTAAGGGGAAGCAACTTATTCTTGGTGTTGATGATATGGACATCTTTAAAGGAGTCAATTTGAAGCTCTTGGCTATAGAATTACTCCTAGAGCAGAATCCAAAACTGCAAGGTGAATTAGTACTAGTCCAAATTGTAAATCCCCCAAAAAGTTCAGGCAAAGATGTTCAGGAAGCAAAGGGGGAGATACACATTATTGCTAACAGGATAAATGAAAGGTTCAGCTTGCTAAATTATGAACCTGTGATCATCATAGATCATCCTCTTCCTTTTTATGAGAAGATAGCCTATTATTCTTTGGCAGAATGTTGCATTGTGAATGCTGTGCGGGATGGTATGAATTTAATTCCATATGAGTATATTGTCTGTAGGCAGGGGAATATGCAAACAGATCAACCCTTGGGAATTATTTCAGAGTTCGCTCGTACAAGTGCGCTTGTTGTTTCTGAGTTTATAGGTTGCTCGCCATCTCTTAGTGGGGCATTGAGGGTGAACCCATGGGACATTAGGGCTGTAGCTGATGCAATAAATTTGGCCATCAATATGTCTATAGCAGAGAAACAGTTGCGGCATGAGAAACACTATAGGTATGTTAGCTCTCATGACATGGGTTATTGGGCTCGAAGTTTTGTGCAGGATCTAGTTCGTTCATGCCAGGATCACCTCTACAAACGTTGTTGGGGTATTGGCTTTGGACTGGGTTTCAGAATCCTGGCCCTTTCTCCCAGTTTTAGGAAGCTGTCAATTGGCCAGATTGTCTCTGCATACAAAAGGTCAAATCAGAGAGCAATTTTTTTGGACTATGATGGTACAATTGTGTCCCAAAATTCCATCGTTAAAAGCCCCAGTCCTGAACTCATATCTGTGCTAAACAACCTATGCAGTGACCCCAAGAACATTGTGTTTTTAGTTAGTGGTAGGGGAAGGGCTTCATTGGGTGAGTGGTTAAATCAGTGCAAGAACCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGATGGACAATCAAGTTGGGAAACAAATCATATAGCTACAGATTTTGCTTGGAAAAGCATTGTTGAACCTGTGATGAGATCATATACTGAGGCAACAGATGGCTCTCATATGGAGATGAAGGAGAGTGCCTTGGTTTGGCACCACCGTGATGCAGATCTTGATTTTGGATCTTGGCAGGCCAAGTCGCTGCTGGATCACCTTGAGAGTGTCCTTACAAATGACCCGGTGGTTGTTAAGAAGGGACAGTACATTGTTGAAGTTAAACCACAGGGAATCACTAAAGGGTTAGTTGTAGAGGAGGTTCTGTCTACACTGGCCAGGACTGAGAAATCGCCAGATTTCATTCTGTGCATTGGGGATGATAGGTCTGATGAGGACATGTTCGAGAGCATATCAACCAAAGTTTACGGAGGAAGCCCATCTTCAGCACCGGAAATCTTTGCTTGCACTGTTGGCCAGAAACCAAGCAAAGCCAGGTACTACTTAGATGATACTGCTGATGTGATGTTGCTGCTTAAAAGCCTTGGTACTGCTGCTTCAAGGCTTAAACCAGTATGTGATGAAGAAGGTCATTCTGACAGAGTAGAAGCTGGTTTTGAGAACATTGCTTGA 2607 0.4116 MVATSCTNLLDLVSGDILNYPQTPRALPRVNTVPGVISDIDGKESTGDDNSHASSSEHSQKIIVVSNFLPLNAQKDKDSGRWCFSYDEDSVLWQLKDAISYDTDVVYVGSLKVDVDESEQEKISQELLDEFKCWPTFLPSLIQNKFYNGFCKQHLWPLFHYMLPMFPDHGNRFDRLLWQAYVAANRIFARRVLEVMNPEVDYVWVHDYHLMVLPTFLRKGYNKVKLGFFLHSPFPSSEIFRILPVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYFGRTIYIKILPVGIHMARLHSAINHPSSSVKVQELCEQFKGKQLILGVDDMDIFKGVNLKLLAIELLLEQNPKLQGELVLVQIVNPPKSSGKDVQEAKGEIHIIANRINERFSLLNYEPVIIIDHPLPFYEKIAYYSLAECCIVNAVRDGMNLIPYEYIVCRQGNMQTDQPLGIISEFARTSALVVSEFIGCSPSLSGALRVNPWDIRAVADAINLAINMSIAEKQLRHEKHYRYVSSHDMGYWARSFVQDLVRSCQDHLYKRCWGIGFGLGFRILALSPSFRKLSIGQIVSAYKRSNQRAIFLDYDGTIVSQNSIVKSPSPELISVLNNLCSDPKNIVFLVSGRGRASLGEWLNQCKNLGIAAEHGYFIRWDGQSSWETNHIATDFAWKSIVEPVMRSYTEATDGSHMEMKESALVWHHRDADLDFGSWQAKSLLDHLESVLTNDPVVVKKGQYIVEVKPQGITKGLVVEEVLSTLARTEKSPDFILCIGDDRSDEDMFESISTKVYGGSPSSAPEIFACTVGQKPSKARYYLDDTADVMLLLKSLGTAASRLKPVCDEEGHSDRVEAGFENIA 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2892 868 Pfam Trehalose-phosphatase 596 830 IPR003337 GO:0003824|GO:0005992
Prci4g2892 868 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 853 - -
Prci4g2892 868 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 548 - -
Prci4g2892 868 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 841 IPR001830 GO:0003824|GO:0005992
Prci4g2892 868 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Prci4g2892 868 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Prci4g2892 868 FunFam Alpha,alpha-trehalose-phosphate synthase 315 530 - -
Prci4g2892 868 SUPERFAMILY HAD-like 593 841 IPR036412 -
Prci4g2892 868 CDD HAD_TPP 594 835 - -
Prci4g2892 868 Pfam Glycosyltransferase family 20 61 545 IPR001830 GO:0003824|GO:0005992
Prci4g2892 868 Gene3D Glycogen Phosphorylase B; 52 314 - -
Prci4g2892 868 NCBIfam HAD-IIB family hydrolase 594 798 IPR006379 -
Prci4g2892 868 Gene3D Glycogen Phosphorylase B; 315 530 - -
Prci4g2892 868 Gene3D - 723 851 IPR023214 -
Prci4g2892 868 Gene3D - 592 708 IPR023214 -
Prci4g2892 868 CDD GT20_TPS 61 545 IPR001830 GO:0003824|GO:0005992
Prci4g2892 868 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 313 - -
Prci4g2892 868 MobiDBLite consensus disorder prediction 38 58 - -
Prci4g2892 868 NCBIfam trehalose-phosphatase 591 840 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2892 Prci-Chr4 40821812 40827549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2892 1 867 Trehalose Biosynthesis Gene Families AT1G23870 65.167 0.0 1219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2892 K16055 - qsa:O6P43_022731 1316.6