Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2876 ATGAAGAAAGCGAGTAGTGACTCTTCCTCAAAAGTGGATCGAAAAACCATAGAAAGGAATCGCAGAATTCACATGAAAGCTCTTTGCTTCAAGCTCGCTTCTCTTATTCCTCCCCACTACTTAAAACACACCAAGGAAATGATATCTCAGCAAGACCAGCTGGACATCGCAGCGAGCTACATAAAGACTCTGAGGGAGAAACTGGAGAACCTGAAGGGGAAGAAGGAGGAGGCCATGAAATTAAAGGAAATAAACAGTAACCTGGGAATGGAGAGCATGTTGATGGCTTCCAATCTGCCACTGCTTGAGCTGAGAGACCTGGGTTCCAGCATAGAGGTGATGCTGATCAGTGGTTTGAACAGAAACTTCATGTTATATGAAGTAATCAGCGTCCTCGAAGAAGAAGGAGCTGAAGTTGTGAGCGCTAGCTTTTCCACTGTGGGTGATAAGATATTCCACACTGTTCATGCCCAGGTGAAAATATCAAGGGTTGGTGTAGAAACCACAAGGGTGTACCAGAGGCTTCATGATTTGATCGCGCCCCTAAAAAGCTGGGAGTATTTTTAA 567 0.448 MKKASSDSSSKVDRKTIERNRRIHMKALCFKLASLIPPHYLKHTKEMISQQDQLDIAASYIKTLREKLENLKGKKEEAMKLKEINSNLGMESMLMASNLPLLELRDLGSSIEVMLISGLNRNFMLYEVISVLEEEGAEVVSASFSTVGDKIFHTVHAQVKISRVGVETTRVYQRLHDLIAPLKSWEYF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2876 188 SMART finulus 15 70 IPR011598 GO:0046983
Prci4g2876 188 FunFam Transcription factor bHLH162 1 93 - -
Prci4g2876 188 Coils Coil 54 84 - -
Prci4g2876 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 64 IPR011598 GO:0046983
Prci4g2876 188 Gene3D - 1 92 IPR036638 GO:0046983
Prci4g2876 188 Pfam Helix-loop-helix DNA-binding domain 13 64 IPR011598 GO:0046983
Prci4g2876 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 76 IPR036638 GO:0046983
Prci4g2876 188 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2876 Prci-Chr4 40740260 40741382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2876 4 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 34.054 1.44e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci4g2876 HLH 6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2876 - - vun:114179389 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2876 4 40740260 40741382 Prci4g2876 4 40740260 40741382 ECH