Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2873 ATGAGGAATTTTTGCTGGTCTAAACAAGTTCCGCTCAACCCGAAACTTGGCCGAAAGCTTTCGCTTGGCGAGTACAATGGAGCCGTGTCGTGGTCCAAGTATCTGGTCTCCTCTGGGGCTGCAATAAAGGAAGACGGAGAAGAGGATTGGAGCGCCGACTTGTCCAGGTTACTCATTGGCGCCAAATTTGCTATTGGCAGTCACAGTAGGATCTACAAAGGCGTCTACAAGAACACCGAAGTGGCAATTAAGATGATAAGCCTACCGGAGGAAGACGAACACTTGGCTTCTTTGCTTGAGAGGCAGTTTAATGCTGAGGTTGCCACGCTCTTTCGACTGCACCATCCAAATATCATCAAGCTTGTTGCCGCCTGCAAGAAATCTCCGGTCTTCTGCATAATTACTGAATATATGCCAGGGGGATCATTGAGAAGATACCTGCGTAACCAAAAGGCCTATTCACTCCCCCCCAAACTTGTTCTGAAATTAGCCCTAGACATTGCACGAGGCATGCAATATCTTCATTCTCAGGGGATACTTCATAGGGATCTCAAATCAGAAAACCTTCTTCTGGGAGGAGATATGCGTGTAAAAGTAGCGGACTTTGGACTCTCCTGCCAGGAATCTGAGAGCTGTACTGCAAGTGAATTTACTGGAACTTATCGTTGGATGGCACCTGAAATGTTGAAAGATAAGAATCATACCAAGAAAGCAGATGTCTACAGTTTTGGCATAGTTCTATGGGAGCTTTTGACATCATTGACACCATATGAGAACATGACCCCAGAGCAGGCAGCATTTGCAGCCTCCCAAAAGAATGTAAGGCCACCATTGCCACCTGAATGTCCTTTGGCATTTAGCTGTCTGGTCACCAGATGCTGGGCGGCCAATCACCATAAACGGCCACACTTCGATGAGATAGTTTCCATCTTGGAGGGCTATTCAGAATCGCTGAAGGAGGATCCAGAATTCTTCTCTCATTTCATACCACCGGCTCCTAATGCTAGTGTCTTTAAGGAATGCTTACCAGGGTGCATTTCTGGTCGTAAATCTGGATTGTGTCATGCTTAA 1071 0.465 MRNFCWSKQVPLNPKLGRKLSLGEYNGAVSWSKYLVSSGAAIKEDGEEDWSADLSRLLIGAKFAIGSHSRIYKGVYKNTEVAIKMISLPEEDEHLASLLERQFNAEVATLFRLHHPNIIKLVAACKKSPVFCIITEYMPGGSLRRYLRNQKAYSLPPKLVLKLALDIARGMQYLHSQGILHRDLKSENLLLGGDMRVKVADFGLSCQESESCTASEFTGTYRWMAPEMLKDKNHTKKADVYSFGIVLWELLTSLTPYENMTPEQAAFAASQKNVRPPLPPECPLAFSCLVTRCWAANHHKRPHFDEIVSILEGYSESLKEDPEFFSHFIPPAPNASVFKECLPGCISGRKSGLCHA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2873 356 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 316 - -
Prci4g2873 356 Pfam Protein tyrosine and serine/threonine kinase 61 311 IPR001245 GO:0004672|GO:0006468
Prci4g2873 356 SMART serkin_6 57 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2873 356 SUPERFAMILY Protein kinase-like (PK-like) 47 311 IPR011009 -
Prci4g2873 356 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Prci4g2873 356 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Prci4g2873 356 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Prci4g2873 356 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Prci4g2873 356 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Prci4g2873 356 CDD STKc_MAP3K-like 64 311 - -
Prci4g2873 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Prci4g2873 356 Gene3D Transferase(Phosphotransferase) domain 1 139 327 - -
Prci4g2873 356 Gene3D Phosphorylase Kinase; domain 1 45 138 - -
Prci4g2873 356 ProSiteProfiles Protein kinase domain profile. 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2873 Prci-Chr4 40691574 40694987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2873 25 347 MAP Kinase Kinase Kinase AT1G62400 54.601 4.58e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci4g2873 PK_Tyr_Ser-Thr 4.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2873 - - pvy:116136179 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2873 4 40691574 40694987 Prci9g1663 9 28892021 28895251 CCT