Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2862 ATGGATTTTTCTCCTCTGCAAGAGCACGTCTGCATGGAGTCTTCGGACCAATGGCTTCAGGGAGCTGTTCAAGAGGAATCTGGAGCAATGGATTCTTCATCTTATTCTCCACCATTAATGGAGAGGAGGGTAAGGCCAGCCCCAACGGACCAAGCTTTGAAGTGTCCGAGGTGTGAGTCCACAAACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCTCAGCCGAGGTACTTCTGCAAAACTTGCAGGAGGTACTGGACCAAAGGAGGCACATTGAGAAACATCCCAGTAGGTGGCGGTTGCAGAAAGAACAAGAAAGTCTCGTCCAAGAAGTCCAACGACGTCGTTCACCCAGTACAGTCAGAACCCAAAGATCTTCATCTCACAGCTTCTAATTTCCCAGATCATCATGCAATGCATTTTCCCCACTCAGTGGGACTGATGGTGGAGAATTCGAGGCTCATGGAAACTAAGTTTGGAGGGATAAACAATGTTATGGGAAATTTTGGCGATGCTGGGGTTTCAGATCAGATAAATTATAGCCACAATGGGTTATTGGCACAGAATTTCCAGGGTTTTGGAGGAAATATGCGTTACTTTGATGGCTATAACATTAATGGCGGGACTTATAGCACAATGGACTCTTTTTACCATGGCAATGAGGATGGTGCGATTCATGATGTGAAGCCAAACCCTAAGCTGTTGTCTCTTGAATGGCAAGACCAAGGTTGTTCTGATGCTGGGAAGGAGCCTTTTGGGTATATCAATAGTCTGGGTTCATGGACTGGCATGAATATGATCAATGGATATGGACCCTCCACAACAAACCCTTTGATCTAA 843 0.4567 MDFSPLQEHVCMESSDQWLQGAVQEESGAMDSSSYSPPLMERRVRPAPTDQALKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNDVVHPVQSEPKDLHLTASNFPDHHAMHFPHSVGLMVENSRLMETKFGGINNVMGNFGDAGVSDQINYSHNGLLAQNFQGFGGNMRYFDGYNINGGTYSTMDSFYHGNEDGAIHDVKPNPKLLSLEWQDQGCSDAGKEPFGYINSLGSWTGMNMINGYGPSTTNPLI 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2862 280 ProSitePatterns Zinc finger Dof-type signature. 55 91 IPR003851 GO:0003677|GO:0006355
Prci4g2862 280 Pfam Dof domain, zinc finger 50 107 IPR003851 GO:0003677|GO:0006355
Prci4g2862 280 ProSiteProfiles Zinc finger Dof-type profile. 53 107 IPR003851 GO:0003677|GO:0006355
Prci4g2862 280 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 146 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2862 Prci-Chr4 40609100 40610698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2862 30 116 C2C2-Dof Transcription Factor Family AT5G60200 65.517 3.04e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci4g2862 zf-Dof 5.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2862 - - pcin:129309705 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2862 4 40609100 40610698 Prci9g1683 9 29053831 29055891 CCT