Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2856 ATGGATTTGGATACAAAGATCAGACAACAATATGTTTCCCAGCCAATGCAGATGCCAGCAATGGACGTGAAATCCAACGTAAAAGATCTCCAGCTTCCTAATTTTGGGGCTCCTTCATCACAGAGTAATTTCTTGCAAGATCTACTCCATATTGATCCATTTCAAGTATATGGATCTTCATCAAATTCAGTTATTGGGGTCCAAACTGCAAATTTTGTTAGCCCTTTAGATAGTTTCTCCGTTGGCTGTTCATCAGAAGATTTTGATGTTTATGAGTCAAAACCATTTATTGAAAATATCAATGGCAATGAAGGGCATGCACATGTTATGGAGAATTTCCAGTTCGGAGGTAATAATTATTATAGCCTCAATGTCTCTCATGAGAGGAATCAAATGGAGGTGGTGGATGCAGACCAGAGCAATTATTATTTTCCATTTGACTCTCAAGAAAGCAAGCCTATCAAATTCGTAGTACCAGATGATGAAGTCTCTGTCATATCTTCAGATCTTAGTTTTCTCCGGAGGGTTGGTTTGAGTAATAGGAATAGCAGGTTATCAGCTTCAATCAGAAGGGCATGCAAAGTTCGGAACAAGTCCAACGTGGTGAAGGGACAGTGGACAGTGGAAGAAGATAGGCTGCTGATTCAGCTGGTTGAAAAGTACGGAGTGAGAAAGTGGTCTCATATTGCTCAGAGTTTGCCTGGGAGAATAGGCAAACAATGTCGAGAGCGTTGGCATAATCATTTAAGGCCTAACATCAAGAAGGACACGTGGAGTAATGAAGAGGATAAGATCCTGATCGAAGCCCACATAGAGATAGGAAATAAATGGGCAGAGATTGCCAAGAAGTTGCCTGGAAGAACTGAAAACTCCATAAAAAACCATTGGAATGCAACCAAGAGAAGGCAATATTCAAAAAGGAAGTGTCGCTCCAAGTACCCTAAACCCTCTCTTCTTCAGGAATACATCAAGAGCTTGAACTTAGACAAAAACCCGCCTATAGATTATAGGAAGAGATCCTCTTCTTCTGCTAACCCTAACAACAACAACAACAATCGTATGACTGGTACAAGGAAAGCATCAGCAAGACTGGCAAGTGAGCAGTTTTGTCCCGACAATGACAGATTGGTTCCTACATATGACTTTAACGACGTCCCAGACTTTTGTTTCGATGAGAACATAAATTTGTTTCAAGAAGTATGCAATCTTGATACTTTACTTGATGATATGCCTTGTGCTCCTGATCATACTGTGCACGGAGGAGACTTTGAAGCAAAGTTGCAATATTGTGACGATGTTGTTAATAATGCTGATTTTGATGAGGATGATCAGTTTGATTTAGGGAAGTCACAGGGTCAGGAGGTGGAACTTAAGAAGGAGATGGATTTGGTGGAGATGATGTCTCAGATCAAAGATGTTCTTGGTTGTGTTTAG 1434 0.4052 MDLDTKIRQQYVSQPMQMPAMDVKSNVKDLQLPNFGAPSSQSNFLQDLLHIDPFQVYGSSSNSVIGVQTANFVSPLDSFSVGCSSEDFDVYESKPFIENINGNEGHAHVMENFQFGGNNYYSLNVSHERNQMEVVDADQSNYYFPFDSQESKPIKFVVPDDEVSVISSDLSFLRRVGLSNRNSRLSASIRRACKVRNKSNVVKGQWTVEEDRLLIQLVEKYGVRKWSHIAQSLPGRIGKQCRERWHNHLRPNIKKDTWSNEEDKILIEAHIEIGNKWAEIAKKLPGRTENSIKNHWNATKRRQYSKRKCRSKYPKPSLLQEYIKSLNLDKNPPIDYRKRSSSSANPNNNNNNRMTGTRKASARLASEQFCPDNDRLVPTYDFNDVPDFCFDENINLFQEVCNLDTLLDDMPCAPDHTVHGGDFEAKLQYCDDVVNNADFDEDDQFDLGKSQGQEVELKKEMDLVEMMSQIKDVLGCV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2856 477 CDD SANT 206 249 IPR001005 -
Prci4g2856 477 PANTHER MYB PROTEIN-RELATED 180 352 - -
Prci4g2856 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 253 IPR017930 -
Prci4g2856 477 FunFam Transcription factor MYB119 256 320 - -
Prci4g2856 477 MobiDBLite consensus disorder prediction 330 360 - -
Prci4g2856 477 Gene3D - 202 254 - -
Prci4g2856 477 ProSiteProfiles Myb-like domain profile. 250 300 IPR001005 -
Prci4g2856 477 SUPERFAMILY Homeodomain-like 200 296 IPR009057 -
Prci4g2856 477 ProSiteProfiles Myb-like domain profile. 198 249 IPR001005 -
Prci4g2856 477 Pfam Myb-like DNA-binding domain 206 264 - -
Prci4g2856 477 Gene3D - 256 322 - -
Prci4g2856 477 MobiDBLite consensus disorder prediction 291 312 - -
Prci4g2856 477 CDD SANT 257 300 IPR001005 -
Prci4g2856 477 MobiDBLite consensus disorder prediction 337 360 - -
Prci4g2856 477 FunFam Transcriptional activator Myb isoform A 202 255 - -
Prci4g2856 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 254 304 IPR017930 -
Prci4g2856 477 SMART sant 202 251 IPR001005 -
Prci4g2856 477 SMART sant 254 302 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2856 Prci-Chr4 40525644 40529952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2856 83 420 MYB Transcription Factor Family AT4G18770 49.300 1.94e-97 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci4g2856 Myb_DNA-bind_6 8.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2856 K09422 - gmx:102662267 476.478