Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2853 ATGCAGAGCACAGCTTTCACTATCTCCCCTTCGCTGCCTCTTCATAAATCTCGCAGATCTTTTACCTCCAACCGCTTCTCTCCTCTGTTTGCGTCCTCTTCCAAGCCCAATGAAAGCTCTTCCTCCTCCTCCTCCTCCTCTTCTTCCTCGTCGTTCCATCGCCGATATTGGGCCGTTGCTTCTTCTTCCTCCTCCTCTTTTAAGTTCAGGCCCTCGACATCCTTGCCTACTCCTGCTTCCTCTGATTCTGACGCTACTCGCTTTGAGGCCCGGGCCACTTCTGTTCCTGAGAGCGCCGACGAGAGCTCCAACGCCTTATTCAAAACTCTGCAGCTCGGATCCTTGTTTGGTCTCTGGTACCTCTTCAATATATACTTTAATATCTACAATAAGCAGGTCTTGAAGGTGTACCAGTTTCCATTAACTGTCACTGCAGTTCAATTTGCCGTTGGGACTCTCCTTGTCTTATTTTTATGGACTTTTAACCTCTATAAAAGGCCTAAAATAAGTGGTTCCCTGCTTGCAGCTATACTGCCTCTGGCTGTGGTACATACTTTAGGGAACCTTTTCACTAACATGAGCCTTGGAAAGGTAGCTGTGTCGTTCACTCACACTATCAAAGCAATGGAGCCTTTCTTTTCAGTGGTCCTTTCTGCTATATTCCTCGGAGAGATGCCAACTGCATTGGTTGTCGCTTCACTTGTGCCTATTGTTGGTGGAGTAGCACTGGCATCTGTCACTGAGGCCTCGTTTAATTGGGCTGGATTTGGGAGTGCGATGGCATCTAATTTGACATTTCAGTCTCGTAATGTTCTTAGCAAAAAGGTCATGGTTAATAAAGAGGAATCAGTGGACAATATAAACCTCTTCTCAATAATTACTGTTTTGTCCTTCTTTTTATTAGCACCTGTGGCTATCTTCATGGAAGGTGTCAAATTTACCCCTGCATACCTGCAATCTGCTGGGTTAAATGTTAGACAACTATACATCAGATCTCTTGTTGCTGCACTCTGTTTCCATGCATATCAACAAGTTTCTTATATGATACTGCAAAGGGTATCGCCTGTTACCCACTCTGTGGGTAACTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCCTCTTCTTCAAAACACCTGTATCACCTGTTAACGCTTTTGGCACTGGTATTGCTCTTGCCGGAGTGTTCCTTTATTCAAGGGCGAAGCGAATGAAGCCAAAGCCAAAGACAGCTTAA 1239 0.4544 MQSTAFTISPSLPLHKSRRSFTSNRFSPLFASSSKPNESSSSSSSSSSSSSFHRRYWAVASSSSSSFKFRPSTSLPTPASSDSDATRFEARATSVPESADESSNALFKTLQLGSLFGLWYLFNIYFNIYNKQVLKVYQFPLTVTAVQFAVGTLLVLFLWTFNLYKRPKISGSLLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAIFLGEMPTALVVASLVPIVGGVALASVTEASFNWAGFGSAMASNLTFQSRNVLSKKVMVNKEESVDNINLFSIITVLSFFLLAPVAIFMEGVKFTPAYLQSAGLNVRQLYIRSLVAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFKTPVSPVNAFGTGIALAGVFLYSRAKRMKPKPKTA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2853 412 Pfam Triose-phosphate Transporter family 110 400 IPR004853 -
Prci4g2853 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 155 246 - -
Prci4g2853 412 PANTHER SOLUTE CARRIER FAMILY 35 111 404 - -
Prci4g2853 412 MobiDBLite consensus disorder prediction 29 51 - -
Prci4g2853 412 MobiDBLite consensus disorder prediction 66 86 - -
Prci4g2853 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 296 405 - -
Prci4g2853 412 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 110 410 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2853 Prci-Chr4 40515306 40518986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2853 1 412 Antiporters AT5G33320 70.024 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2853 K15283 - zju:107418346 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2853 4 40515306 40518986 Prci9g1690 9 29103425 29107211 CCT
Prci4g2853 4 40515306 40518986 Prci9g1690 9 29103425 29107211 ECH
Prci4g2853 4 40515306 40518986 Prci4g2853 4 40515306 40518986 ECH