Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2826 ATGCCTGAAAATCCATGGACCCTCTTCTTCCTAGTAACTGCTCTTTTACTTCATTCCCAATCTTCTATTGCTTCTTCTGTTAACCCACAAGGGCAAGCTCTTGTTTCATGGAAGACGACCCTGAACGGGTCCTTGGAGGTGCTGAGTAATTGGAACCCAACTGACGATGTTCCATGTGGTTGGTTTGGAGTTAGCTGCAACTTCAAGAACGAGGTTGTTCAATTAGATCTGAGGTATGTTGATTTGCTTGGAAGCCTTCCTTCTAATTTCACCTCATTGCGTTCCTTGACCAAGCTTATCCTTATTGGGACGAACCTCACTGGTTCAATCCCAAAAGAGATAGGCTCACTTGCAAGCCTCACCTACTTGGACTTGAGTGACAATGCCTTGACTGGTGAGATCCCAAGCGAGCTCTGCTTTTTGCCTGAGCTTCAAGAACTTCACCTGAACTCAAACCAGCTTGAGGGGTCGATTCCAATTGCAATTGGGAACCTCACAAAGTTGGAGAGGCTGATCTTATATGATAATCAGCTAAGTGGTGAGATTCCCTCAACGATTGGGAATCTGAAGAATCTGCAAGTGATTCGTGCTGGTGGAAACAAGAACCTTGAAGGTGCTTTGCCTCAAGAAATAGGAAATTGTACCAAATTGGTCATGTTGGGTTTAGCTGAAACAAGTATCTCAGGATTTCTCCCACCTACTCTTGGTCTTCTCAAGAAGCTGAACACCATTGCAATTTACACTTCCCTCCTCTCTGGTCAGATTCCTCCTGAACTCGGTGACTGCACTGAACTTCAGAACATTTATTTGTACGAGAACTCCCTCACCGGATCATTGCCCAGCAAATTGGGAAATCTTAGGAATCTCAAGAATCTTCTTTTGTGGCAGAACAATTTGGTTGGAACCATCCCACAAGAAATTGGGAATTGCTACCAGTTATCGGTCATTGACATCTCAATGAACTCGCTTACAGGAAGCATTCCCAAGAGTTTTGGAAATTTGACGGCTTTGGAAGAACTCCAACTCAGCGAAAACCAGATTTCAGGGGGGATTCCTACAGACCTAGGGAACTGTGAGCAACTTACTCATGTTGAACTGGACAACAATCAAATCACGGGGACGATACCTTCTGAATTGGGAAACCTTAGTAATCTGACGTTGTTGTTCCTGTGGCATAACAAGCTCGAAGGAAATATACCATCTTCACTTTCGAATTGCCAAAACCTGGAGGCTGTGGATCTGTCACAGAATGCACTAACGGGTCCCATACCGAAGGGCATATTCGAGCTCAAGAATCTCAACAAGCTTTTGCTACTTTCTAATAATCTCTCCGGAAACATGCCATCTGAAATTGGAAATTGTTCGTCTTTGATTCGGTTCCGGGCGAGCAATAATAAGATCACAGGGAGCATCCCCCCACAGATTGGGAATCTGAGAAACTTGAATTTTTTGGATCTTGCAAACAATCGGATTTCCGGAGTCATTCCGGAAGAGACGTCAGGCTGCAGGAATCTCGCGTTTGTGGACCTTCATTCCAATATGATCGCCGGGAGCTTGCCGGAGAGTCTGAGTGAGCTTGTCTCCCTGCAATTTATTGACTTCTCCAATAACATGATTGAAGGCACACTAAGCCCGAAACTAGGATCGCTTGGTTCACTCACAAAACTGGTTCTTGGAAAGAATCATATTTCTGGATCAATTCCGGGTCAACTCGGTTCCTGCTCGAAGCTTCAGTTGCTGGATCTCAGCTGCAACAATTTCTCCGGCAATATTCCCGGTAGTCTTGGTAATATTCCGGGTCTTGAAATTGCACTGAATCTAAGCTGGAATAAACTTTCCGGCGAGATTCCTCAGGAGTTTTCAGGCTTGGTTAAGCTGGGCATGTTAGACATTTCCCACAACGAGATCAACGGCAACCTTCGCTATCTCGCGGGCCTCCAAAATCTTGTCGTCCTCAATATCTCGTATAACAGATTCTCCGGCCGCATCCCGGACACGCCTTTTTTCGCAAAACTTCCTCTAAATATGCTCGCCGGCAACCCTTCGCTCTGCCTCTCCGTAAACCGGTGTGCAGAAGACGATTCTGGAAGTCGTTCAGGCAGGCGCGCGAAGACGGCGCGTATAGCTATGGTGGCCCTACTTTGCACCGCATGTGCTCTCCTCTTGGCGGCGCTGTACGTCGTCGTCGCGGCAAAACGACGACAAAGGGGCCACGGTAACGATCTCGACCTCGATGGGAGGGATAGCGACTTGGAGATGGGCCCACCATGGGAGGTGACAGTATACCAGAAACTCGACCTGTCAATTTCTGACGTGGCGAAGTGTCTCACGGCTGGAAACGTCATCGGTCGAGGCCGATCCGGGGTGGTTTACAGAATGAACATCCCAGCGGGGTTAGACATGGCCGTGAAGAGGCTCCGATCGTCGGAGAAATTCTCAGCGGTGGCGTTCTCGTCGGAGATAGCGACATTGGCGAGAATACGACACCGTAATATCGTGAGGCTATTGGGCTGGGCGGCGAACCAGAAGACGAAGTTACTGTTCTATGATTATTTACCGAACGGTAACCTGGATACACTTTTACACGAAGGGTGCACAGGATTAATCGAGTGGGAGACACGGTTCAGGATAGCACTAGGCGTGGCGGAAGGCTTAGCTTACTTACACCATGACTGCGTGCCTGCTATCTTGCACCGGGACGTAAAAGCGCACAACATTTTGCTAGGAGACAGGTACGAGCCATGCCTCGCAGATTTTGGTTTTGCCAGATTTGTACACGACGACCACGCTTCCTTCTCCGTGAATCCCCAGTTCGCTGGCTCTTACGGCTACATTGCGCCAGAATATGGCTGCATGTTGAAGATAACAGAGAAGAGCGACGTGTATAGTTACGGAGTGGTACTTTTAGAGATAATAACAGGGAAACGACCGGTGGACGCGTCGTTTGGTGAAGGGCAACATGTGATAGATTGGGTGAGAGATCATCTGAAGAAGAAGAAGGACCCTGTGGAGATTGTGGATCCAAAGCTTCAAGGCCACACAGACACACAAATACAAGAGATGCTTCAAGCACTGGGAATCTCCCTCCTCTGCACCAGCACTCGTCCCGACGATCGTCCCACCATGAAAGACGTCGCCGCCTTGCTCCGGGAAATCCGCCACGATCCTCCGGCCGGCCCCGACGCCCACAAGCCCAAGCCCAATCCTACCACCAACTCTTCTTCTTCCTCCTCTGTCAGTCCCGCTCAGTTGTTGCTTCTTGACCATCCTTCGTCTCATTCTTCGTCACTTGCTTATTCGTCTTCTACTCTGCAAGGAAGGAGTGCATGA 3330 0.4859 MPENPWTLFFLVTALLLHSQSSIASSVNPQGQALVSWKTTLNGSLEVLSNWNPTDDVPCGWFGVSCNFKNEVVQLDLRYVDLLGSLPSNFTSLRSLTKLILIGTNLTGSIPKEIGSLASLTYLDLSDNALTGEIPSELCFLPELQELHLNSNQLEGSIPIAIGNLTKLERLILYDNQLSGEIPSTIGNLKNLQVIRAGGNKNLEGALPQEIGNCTKLVMLGLAETSISGFLPPTLGLLKKLNTIAIYTSLLSGQIPPELGDCTELQNIYLYENSLTGSLPSKLGNLRNLKNLLLWQNNLVGTIPQEIGNCYQLSVIDISMNSLTGSIPKSFGNLTALEELQLSENQISGGIPTDLGNCEQLTHVELDNNQITGTIPSELGNLSNLTLLFLWHNKLEGNIPSSLSNCQNLEAVDLSQNALTGPIPKGIFELKNLNKLLLLSNNLSGNMPSEIGNCSSLIRFRASNNKITGSIPPQIGNLRNLNFLDLANNRISGVIPEETSGCRNLAFVDLHSNMIAGSLPESLSELVSLQFIDFSNNMIEGTLSPKLGSLGSLTKLVLGKNHISGSIPGQLGSCSKLQLLDLSCNNFSGNIPGSLGNIPGLEIALNLSWNKLSGEIPQEFSGLVKLGMLDISHNEINGNLRYLAGLQNLVVLNISYNRFSGRIPDTPFFAKLPLNMLAGNPSLCLSVNRCAEDDSGSRSGRRAKTARIAMVALLCTACALLLAALYVVVAAKRRQRGHGNDLDLDGRDSDLEMGPPWEVTVYQKLDLSISDVAKCLTAGNVIGRGRSGVVYRMNIPAGLDMAVKRLRSSEKFSAVAFSSEIATLARIRHRNIVRLLGWAANQKTKLLFYDYLPNGNLDTLLHEGCTGLIEWETRFRIALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDRYEPCLADFGFARFVHDDHASFSVNPQFAGSYGYIAPEYGCMLKITEKSDVYSYGVVLLEIITGKRPVDASFGEGQHVIDWVRDHLKKKKDPVEIVDPKLQGHTDTQIQEMLQALGISLLCTSTRPDDRPTMKDVAALLREIRHDPPAGPDAHKPKPNPTTNSSSSSSVSPAQLLLLDHPSSHSSSLAYSSSTLQGRSA 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2826 1109 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 508 591 - -
Prci4g2826 1109 MobiDBLite consensus disorder prediction 1066 1109 - -
Prci4g2826 1109 MobiDBLite consensus disorder prediction 1054 1109 - -
Prci4g2826 1109 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 852 1066 - -
Prci4g2826 1109 SUPERFAMILY Protein kinase-like (PK-like) 765 1051 IPR011009 -
Prci4g2826 1109 SUPERFAMILY L domain-like 375 686 - -
Prci4g2826 1109 Pfam Leucine rich repeat 552 612 IPR001611 GO:0005515
Prci4g2826 1109 Pfam Leucine rich repeat 287 347 IPR001611 GO:0005515
Prci4g2826 1109 ProSiteProfiles Leucine-rich repeat profile. 480 501 IPR001611 GO:0005515
Prci4g2826 1109 Pfam Leucine Rich repeat 118 134 IPR001611 GO:0005515
Prci4g2826 1109 Gene3D Ribonuclease Inhibitor 140 217 IPR032675 -
Prci4g2826 1109 ProSiteProfiles Leucine-rich repeat profile. 119 142 IPR001611 GO:0005515
Prci4g2826 1109 SMART LRR_sd22_2 334 360 - -
Prci4g2826 1109 SMART LRR_sd22_2 117 140 - -
Prci4g2826 1109 SMART LRR_sd22_2 165 191 - -
Prci4g2826 1109 SMART LRR_sd22_2 382 411 - -
Prci4g2826 1109 SMART LRR_sd22_2 478 499 - -
Prci4g2826 1109 SMART LRR_sd22_2 526 541 - -
Prci4g2826 1109 SMART LRR_sd22_2 623 648 - -
Prci4g2826 1109 SMART LRR_sd22_2 262 288 - -
Prci4g2826 1109 Gene3D Ribonuclease Inhibitor 426 697 IPR032675 -
Prci4g2826 1109 ProSiteProfiles Protein kinase domain profile. 776 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2826 1109 Gene3D Ribonuclease Inhibitor 29 139 IPR032675 -
Prci4g2826 1109 SUPERFAMILY RNI-like 75 396 - -
Prci4g2826 1109 SMART LRR_typ_2 286 310 IPR003591 -
Prci4g2826 1109 SMART LRR_typ_2 646 679 IPR003591 -
Prci4g2826 1109 SMART LRR_typ_2 334 358 IPR003591 -
Prci4g2826 1109 SMART LRR_typ_2 165 189 IPR003591 -
Prci4g2826 1109 SMART LRR_typ_2 117 139 IPR003591 -
Prci4g2826 1109 SMART LRR_typ_2 478 502 IPR003591 -
Prci4g2826 1109 SMART LRR_typ_2 141 164 IPR003591 -
Prci4g2826 1109 SMART LRR_typ_2 407 430 IPR003591 -
Prci4g2826 1109 SMART LRR_typ_2 550 574 IPR003591 -
Prci4g2826 1109 SMART LRR_typ_2 382 406 IPR003591 -
Prci4g2826 1109 Pfam Protein kinase domain 779 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2826 1109 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 201 424 - -
Prci4g2826 1109 Gene3D Phosphorylase Kinase; domain 1 760 851 - -
Prci4g2826 1109 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Prci4g2826 1109 Gene3D Ribonuclease Inhibitor 327 425 IPR032675 -
Prci4g2826 1109 Gene3D Ribonuclease Inhibitor 220 326 IPR032675 -
Prci4g2826 1109 Gene3D Transferase(Phosphotransferase) domain 1 852 1060 - -
Prci4g2826 1109 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 306 1051 - -
Prci4g2826 1109 FunFam Leucine-rich repeat receptor protein kinase EMS1 425 507 - -
Prci4g2826 1109 FunFam Putative LRR receptor-like serine/threonine-protein kinase 604 689 - -
Prci4g2826 1109 ProSitePatterns Protein kinases ATP-binding region signature. 782 804 IPR017441 GO:0005524
Prci4g2826 1109 SMART serkin_6 776 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2826 1109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Prci4g2826 1109 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 27 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2826 Prci-Chr4 40314356 40319155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2826 26 1104 Receptor kinase-like Gene Family AT5G56040 53.102 0.0 1109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci4g2826 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2826 - - gmx:100778064 1672.52