Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2811 ATGGCGTCGTCGTCGTCGAGCTCTTACAATTCTCCATGTGCTGCCTGCAAGTTCCTCAGGAGAAAATGCTTGCCAGGTTGTATTTTCGCTCCTTACTTCCCACCCGAAGAGCCTCAGAAATTCGCCAACGTCCACAAAATATTCGGTGCCAGTAACGTCACGAAGCTCCTCAACGAGCTCCCTCCTCACCAGCGAGAAGACGCCGTCAATTCCCTCGCCTACGAGGCCGAGGCTCGCGTCAGAGACCCCGTCTACGGCTGCGTCGGCGCCATCACTTTCCTCCAGAAACAGGTCCAGAGGCTTCAGAAGGAGCTCGACGCCGCTAACGCCGACCTGCTCCGTTATGCCTGCAACGACATTGCGTCGCAGCCTGGAGTGACCTCCTGTGTGCCTCAACGGCAAAGGCCTGTGGACTTTGCTGGCGGTGGTGGCTCTTCTGATGCCCTTTATAGACAATCTTCGAGCAGTTATTCTCTTCCTTATTCTCTTCCCTGGGCTGATTCTTCTTCAGAGGAGTTCAATGGAGGGGGAGGAGAAGGTAATAATTTGTGA 552 0.5471 MASSSSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELPPHQREDAVNSLAYEAEARVRDPVYGCVGAITFLQKQVQRLQKELDAANADLLRYACNDIASQPGVTSCVPQRQRPVDFAGGGGSSDALYRQSSSSYSLPYSLPWADSSSEEFNGGGGEGNNL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2811 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 131 - -
Prci4g2811 183 Coils Coil 91 118 - -
Prci4g2811 183 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Prci4g2811 183 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2811 Prci-Chr4 40195773 40197920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2811 3 172 AS2 family AT5G63090 63.934 9.62e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci4g2811 LOB 6.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2811 - - gmx:100799774 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2811 4 40195773 40197920 Prci9g1728 9 29330554 29332941 CCT
Prci4g2811 4 40195773 40197920 Prci9g1728 9 29330554 29332941 ECH
Prci4g2811 4 40195773 40197920 Prci4g2811 4 40195773 40197920 ECH