Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2810 ATGGCGTCGTCGTCGTCGAGCTCTTACAATTCTCCATGTGCTGCCTGCAAGTTCCTCAGGAGAAAATGCTTGCCAGGTTGTATTTTCGCTCCTTACTTCCCACCCGAAGAGCCTCAGAAATTCGCCAACGTCCACAAAATATTCGGTGCCAGTAACGTCACGAAGCTCCTCAACGAGCTCCCTCCTCACCAGCGAGAAGACGCCGTCAATTCCCTCGCCTACGAGGCCGAGGCTCGCGTCAGAGACCCCGTCTACGGCTGCGTCGGCGCCATCACTTTCCTCCAGAAACAGGTCCAGAGGCTTCAGAAGGAGCTCGACGCCGCTAACGCCGACCTGCTCCGTTATGCCTGCAACGACATTGCGTCGCAGCCTGGAGTGACCTCCTGTGTGCCTCAACGGCAAAGGCCTGTGGACTTTGCTGGCGGTGGTGGCTCTTCTGATGCCCTTTATAGACAATCTTCGAGCAGTTATTCTCTTCCTTATTCTCTTCCCTGGGCTGATTCTTCTTCAGAGGAGTTCAATGGAGGGGGAGGAGAAGGTAATAATTTGTGA 552 0.5471 MASSSSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELPPHQREDAVNSLAYEAEARVRDPVYGCVGAITFLQKQVQRLQKELDAANADLLRYACNDIASQPGVTSCVPQRQRPVDFAGGGGSSDALYRQSSSSYSLPYSLPWADSSSEEFNGGGGEGNNL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2810 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 131 - -
Prci4g2810 183 Coils Coil 91 118 - -
Prci4g2810 183 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Prci4g2810 183 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2810 Prci-Chr4 40195711 40197920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2810 3 172 AS2 family AT5G63090 63.934 9.62e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci4g2810 LOB 6.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2810 - - gmx:100799774 253.832