Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2799 ATGTCTCGTCTTATTTTTCCTCCCCCATATAAACAGTATTGCTGCTCTTTATTGGTCAAAATTAAATACAAACCATTGGATGCGTGCCTTAATCTTGATGGCGCTGACCATATCCACACCCACCTGCTCGCCCCCTCCTCCCCCTCGCCGATGACGGCGACGGGTTCAGCAGCGATGGGGACGATCCTGTTCCTTCTCTTCTTCCTCGTCCAGATCTCCCGCAGCTCTGCACTTGACTTCCTCTTCAATTCCTTCAACGGCATCATCAATGGCACCAACCTCACTCTCATCAGCGACGCTCGCGTCGACCACACCGTCATCCGCATGACCAACGACTCCAACCAGTACTCCTTTGGACGATCCTTCTACCCCACCGCCATCACCATGAAACCAAACTCAAACTCCTCCAACATTTCTTCCTTCTCCACTTCCTTCGTTTTCTCCATTTTGCCCCAGATCTCCACCAGCCCAGGTTTCGGTCTTGCCTTCGTCCTCACCAGCACCATGTCTCCTCCCGGCGCCCTCGCCAGTCAGTACTTTGGCCTCTTCACCAACGCCACCCATCCCACAGTCTCTCCCCTGTTCGCTGTTGAATTCGACACCGGACAGAACCCAGAGTTCAACGATCCAGATGATAACCACATCGGGATTGATCTGAACAACATCGAATCCATCGAGAAAAGATCTGCTGGCTACTATAATTCAACTGGTGGTTTCGTGCCTATTCGAATGCGTAATGGTCGAAACGTTCGAGCTTGGGTAGAGTTCGATGGAGCAAATTTGGAAATAAATGTTACGGTTGCGCCAATTGGCGTTCCTCGCCCATCAAGGCCCACGCTTTCGTATAAAAATCCCGTTATAGCTAATTACGTCTCTGCGGAGATGTATGTTGGATTTTCTGCATCGAAGACGAATTGGGTTGAAGCACAGAGACTTCTAGCTTGGAGCTTTAGCGACAGTGGACCTGCGAGAGACATTAACACATTAAATTTACCAGTTTTTCAGCCAGAGTCGTCGTCTTCGAAGCTTTCTGGAGGAGCGATTGCTGGAATTGTGGTTGGATGCGTTGCTTTTACGGTGATTTGTGGTTCAGGGTTTTACTTGTGGTGGCGAAACAAGAAATTGAGAGACCAAGAGGACGAAATTGAAGATTGGGAGCTAGAGTATTGGCCCCACAGATTCTCATATGAGGAGCTCAGCGTGGCTACTGATGAATTCCGCTATGACAATCTTTTAGGTTCAGGAGGATTCGGGAAAGTCTACAAAGGAACACTGTGGAACAACACAGAAATTGCAGTCAAATGCGTCAACCATGATTCCAAGCAGGGATTACGAGAATTTATGGCGGAGATCTCCAGCATGGGGAGGCTTCAACACAAGAATTTGGTTCAGATGAGGGGATGGTGCAGAAAAGGGAACGAGCTCATGCTTGTTTACGACTATATGCCCAATGGAAGTCTGAACAAATGGATTTTCGACAAACCAGCGAAGCTTCTAGGCTGGGAACGACGTCGCCGGATCCTCGTCGACGTCGCGGAAGGGCTAAACTATCTACACCATGGTTGGGATCAAGTAGTGATACACAGAGACATTAAATCGAGCAACATATTGCTGGACTCGGATATGAGAGGTAGATTGGGGGATTTTGGTCTCGCTAAGCTTTATCAACAAGGTGAAGTTCCAAACACGACGAGGGTGGTCGGTACGTTGGGGTATTTGGCACCTGAGCTGGCGTCGGTGGCTGCCCCGACGTCGGCGAGCGATGTGTACAGCTTCGGAGTGGTGTTGTTGGAGGTTGCGTGTGGGCGGAGACCGATAGAGACGTCGGCGCCGGAAGATGAGGTGGTGCTGATTGATTGGGTGAGGGATTTGTATGCGAAAGGGAGTGCAGTGGAGGCGGCGGATACAAGGATCAAGGGTGAGTACGATGAGGAAGACATGGAGATGATTTTGAAGCTTGGTCTAGCTTGTTGTCACCCTGATCCGCAGAGGAGGCCGACCATGAAGGAGGTGGTTGTGCTTTTGGTGGGCGAGGAACTCGGGGCGGCGCCGGTGGAATCGTTGTCTGAGTTAGCTCGGGGCGCGAGCGGCGCTGTGAATGGTGACGGCGACGGCGACTAA 2121 0.5087 MSRLIFPPPYKQYCCSLLVKIKYKPLDACLNLDGADHIHTHLLAPSSPSPMTATGSAAMGTILFLLFFLVQISRSSALDFLFNSFNGIINGTNLTLISDARVDHTVIRMTNDSNQYSFGRSFYPTAITMKPNSNSSNISSFSTSFVFSILPQISTSPGFGLAFVLTSTMSPPGALASQYFGLFTNATHPTVSPLFAVEFDTGQNPEFNDPDDNHIGIDLNNIESIEKRSAGYYNSTGGFVPIRMRNGRNVRAWVEFDGANLEINVTVAPIGVPRPSRPTLSYKNPVIANYVSAEMYVGFSASKTNWVEAQRLLAWSFSDSGPARDINTLNLPVFQPESSSSKLSGGAIAGIVVGCVAFTVICGSGFYLWWRNKKLRDQEDEIEDWELEYWPHRFSYEELSVATDEFRYDNLLGSGGFGKVYKGTLWNNTEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWIFDKPAKLLGWERRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSDMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLAPELASVAAPTSASDVYSFGVVLLEVACGRRPIETSAPEDEVVLIDWVRDLYAKGSAVEAADTRIKGEYDEEDMEMILKLGLACCHPDPQRRPTMKEVVVLLVGEELGAAPVESLSELARGASGAVNGDGDGD 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2799 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Prci4g2799 706 Gene3D Transferase(Phosphotransferase) domain 1 482 682 - -
Prci4g2799 706 Pfam Legume lectin domain 78 331 IPR001220 GO:0030246
Prci4g2799 706 SMART serkin_6 406 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2799 706 SUPERFAMILY Protein kinase-like (PK-like) 382 675 IPR011009 -
Prci4g2799 706 ProSiteProfiles Protein kinase domain profile. 406 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2799 706 CDD STKc_IRAK 412 672 - -
Prci4g2799 706 PANTHER - 98 678 - -
Prci4g2799 706 FunFam L-type lectin-domain containing receptor kinase S.1 391 481 - -
Prci4g2799 706 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Prci4g2799 706 FunFam L-type lectin-domain containing receptor kinase S.4 76 325 - -
Prci4g2799 706 CDD lectin_legume_LecRK_Arcelin_ConA 78 321 IPR001220 GO:0030246
Prci4g2799 706 FunFam L-type lectin-domain containing receptor kinase S.4 482 687 - -
Prci4g2799 706 Pfam Protein kinase domain 408 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2799 706 Gene3D Phosphorylase Kinase; domain 1 376 481 - -
Prci4g2799 706 SUPERFAMILY Concanavalin A-like lectins/glucanases 64 324 IPR013320 -
Prci4g2799 706 Gene3D - 76 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2799 Prci-Chr4 40073269 40075723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2799 73 677 Receptor kinase-like Gene Family AT1G15530 69.787 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci4g2799 Pkinase 1.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2799 - - pcin:129309359 1408.28