Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2798 ATGGACTCCAAGCACACGCCTGCACTTAAGTTCCTCTGTAGTTACGGCGGCAAGATTCTTCCCCGTTCCATCGACGGCAGTCTCCGTTATGTCGGCGGCCACACCAGAGTCCTCTCCGTTGATCCTTCAATTGCCTTTTCAGACCTCATGGGAAAGCTTGTTGAGTTCTGTGGTTCGTCTGTGAACTTGAAGTGTTCGTTACCCAGCGGAGACCTCGAGACGTTGATTTCAGTAACTAATGATGATGATTTGGTCATTATTATCGACGAATATAATCAAGCATCGTCGTCTATGGCTCACCCGTTGAAGATCAGAGCCATTCTTACGCCCCCAAGGTCTCTCAAAAAAGTTTCTTCTTCTCCTCCGTCTTCGCGGTCGAGCGCCGACCTCTCTTCAACTGAATCGACTCGCTCCTCCACTGAATCGTTGCCGTATTTTCCTGCCTATCGGGTCGTCCGTCCGGTAGCGTATCCGGTGGGAGTCCGTAACGGTTGGGGAAAAGCGTGCTGCTATCCCGATTGTTACGACAGAAGCTCTCGATTCCTGAACCGTAGACCTAGCTGCCCCAATTTCTGCCACTGA 582 0.512 MDSKHTPALKFLCSYGGKILPRSIDGSLRYVGGHTRVLSVDPSIAFSDLMGKLVEFCGSSVNLKCSLPSGDLETLISVTNDDDLVIIIDEYNQASSSMAHPLKIRAILTPPRSLKKVSSSPPSSRSSADLSSTESTRSSTESLPYFPAYRVVRPVAYPVGVRNGWGKACCYPDCYDRSSRFLNRRPSCPNFCH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2798 193 SMART PB1_new 23 111 IPR000270 GO:0005515
Prci4g2798 193 MobiDBLite consensus disorder prediction 113 140 - -
Prci4g2798 193 SUPERFAMILY CAD & PB1 domains 25 116 - -
Prci4g2798 193 Gene3D - 29 108 - -
Prci4g2798 193 PANTHER OS05G0427100 PROTEIN-RELATED 6 127 - -
Prci4g2798 193 CDD PB1_UP2 12 108 - -
Prci4g2798 193 Pfam PB1 domain 24 96 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2798 Prci-Chr4 40044446 40045677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2798 9 141 MAP Kinase Kinase Kinase AT1G04700 37.594 3.54e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2798 - - qsa:O6P43_022662 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2798 4 40044446 40045677 Prci9g1736 9 29405513 29406523 CCT
Prci4g2798 4 40044446 40045677 Prci4g2798 4 40044446 40045677 ECH