Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2763 ATGTCTATCACATCGTCGATACCTTTGTTGAAGACCCTAACAATGGCAGAATCACGCCTTCTCTCGCTGCCATCTTCAATCTCCAACAAAACCAAGCACCCTTTTACCTCCATTCCGTCCAAACCCTTTCAACTTCAGGTTTCTTGCTCCAATTCCTCTCTCTTTTTACCACCTCTGTCCCTTACCCTCACTAGGAAAACCCACAATTTATCTATACTCACATTCGTAGCCCAGACTTCGGACTGGGCTCAACAGGAGGAAGACAACACCGTCACCATAGATGAAGAAGAAAATCAAGACTTGGATGACCCAGAAGCTCGTCTTTCGGATTGGGATGTTGATGGTGAAGGCGCGGCAATTGAGGGTAGCGAGGGCGAAGGAGAGAGTAATGAAGATGATGAATTTTTGAAGGACGGTGATTTCTCAGAACCACCGGAAGATGCAAAACTTTTTATCGGTAATTTGCCTTATGACGTTGACAGCCAGAGATTAGCAATGCTTTTTGAGCAGGCTGGAACGGTGGAAATTGCCGAAGTTATTTATAATAGGAGCACTGACCAAAGTCGTGGGTTCGGATTTGTAACGATGAGTACAGTTGAGGAAGCAGAGAAAGCTATTGAAAAGTTCAATCGCTACGATCTCGATGGAAGACTGTTGACTGTTAACAAGGCTGCTCCCAGAGGAACACAGCCAGAACGCCCACTGCGATCCTTTGAACCATATTTCAGAGTCTACGTAGGCAACTTGCCATGGGATGTCGATAATGGTCGCCTGGAGCAGATTTTCAGTGAACATGGTAAGGTTGTCAATGCTCGGATAGTCTATGACAGAGAGACTGGTCGCTCTCGTGGTTTTGGCTTTGTCACTATGTCCAGTGAGACAGAAATGAATGATGCCATTGCTGCTCTTGATGGTCAGAGTTTGGACGGGAGGGCAATTAGAGTAAATGTTGCTGAGGAAAGGCCAAGGAGAGGTGGCTTTTGA 984 0.4614 MSITSSIPLLKTLTMAESRLLSLPSSISNKTKHPFTSIPSKPFQLQVSCSNSSLFLPPLSLTLTRKTHNLSILTFVAQTSDWAQQEEDNTVTIDEEENQDLDDPEARLSDWDVDGEGAAIEGSEGEGESNEDDEFLKDGDFSEPPEDAKLFIGNLPYDVDSQRLAMLFEQAGTVEIAEVIYNRSTDQSRGFGFVTMSTVEEAEKAIEKFNRYDLDGRLLTVNKAAPRGTQPERPLRSFEPYFRVYVGNLPWDVDNGRLEQIFSEHGKVVNARIVYDRETGRSRGFGFVTMSSETEMNDAIAALDGQSLDGRAIRVNVAEERPRRGGF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2763 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 148 226 IPR000504 GO:0003723
Prci4g2763 327 MobiDBLite consensus disorder prediction 117 140 - -
Prci4g2763 327 Gene3D - 232 327 IPR012677 -
Prci4g2763 327 MobiDBLite consensus disorder prediction 88 103 - -
Prci4g2763 327 SUPERFAMILY RNA-binding domain, RBD 144 233 IPR035979 GO:0003676
Prci4g2763 327 SUPERFAMILY RNA-binding domain, RBD 238 325 IPR035979 GO:0003676
Prci4g2763 327 SMART rrm1_1 149 222 IPR000504 GO:0003723
Prci4g2763 327 SMART rrm1_1 243 316 IPR000504 GO:0003723
Prci4g2763 327 MobiDBLite consensus disorder prediction 87 141 - -
Prci4g2763 327 Gene3D - 76 231 IPR012677 -
Prci4g2763 327 FunFam 31 kDa ribonucleoprotein, chloroplastic 77 231 - -
Prci4g2763 327 FunFam 31 kDa ribonucleoprotein, chloroplastic 232 326 - -
Prci4g2763 327 CDD RRM2_NsCP33_like 243 318 - -
Prci4g2763 327 CDD RRM1_PSRP2_like 149 228 - -
Prci4g2763 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 244 314 IPR000504 GO:0003723
Prci4g2763 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 150 219 IPR000504 GO:0003723
Prci4g2763 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 242 320 IPR000504 GO:0003723
Prci4g2763 327 PANTHER OS02G0815200 PROTEIN 33 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2763 Prci-Chr4 39713591 39716424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2763 150 324 Eukaryotic Initiation Factors Gene Family AT3G16380 35.326 7.42e-22 94.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2763 4 39713591 39716424 Prci4g2763 4 39713591 39716424 ECH