Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2756 ATGGATGGAAGGCGGCATTCGGTTGATATTCCTATTTCGAAAACTCTTATAGCGTTGAGGAGGGTCAGGTCATTGAGAGATCCATCTACAAATTCTATGAGCAAACTCTGTTCTTCGATTGATAATCTGCACTGGGAGAACAATTCGGGCCATGGGATTTCTCTGCAGTTCGTGGACGCTCCTCGGGCTTGTGATTCTGATGATAATGGTACATCAAGGTCAAAGAATTTAAGTTGCAGCATTCGCAGAGAGCACGATGCTACTGATTTTGAATTGAACTGTGCTCATTTCAACTCTAAACTGAAGTCTTGTCCTGAAGGGCAGCAGGATGAAGTACTAGCTTACTCTAATTTGAATCACGAAGGCAATTCTGGTGTCAAGTCAACAAGTGATTGCTGCCATAGCAACCATAGACGCAAGGAATTAGATGTAGAATCTATTATGCCTCCTAGTAACGAGGCAACTTCTGGATCATCAAAGTTAGGGATAGTTGATCATTCTAAGTTGACTAAAAAAACTCTATGCAAGAGCCAAGTGAAATCATCTGAAGTTCTGGGCGATATTGGTGGTCTTAGTAGTCCATGCCTTTCAGTCGGTGAAGCTCTCTCAGCTTATAGTTCATCGGCGAATATGAATCAAGATGTTGATGTTGTAGATAATGATCACCATGGATGTGGAATAAGCTGCTGTTGGTCGAAATCACCAAGGCTTAGAGAAGCAAATATATATTCTGATATAGAAGACCGTCCCCTGATATCCTGGCACACGGATGAGACAGCTCTTTATGGAAATAAAAACTTGAGACACATTGGTGGTGAAATTAGTCCAAATTTTGGAACTCCTAGAAGTTTATGTATGAAATTCAGGCCTAAATCTTTTAATGATTTGGTTGGACAAAATGTGGTAGCGAGGTCTCTTTTGGGTGCCATCTCTAAGGGAAGGGTAACCTCATTCTATCTCTTTCATGGTCCTCGTGGTACTGGCAAGACATCTGCATCTAGGATTTTTGCTGCTGCACTGAATTGTCTCTCCTTTGAGGAGGAAAGGCCATGTGGTCTGTGCAGAGAGTGTGTTTTGTTCTTTTCTGGTAGAAGTAAAGATGTTAAAGAAGTTGATTCTGCAAGAATCAATCGCATTGACAAAGTAAAATCCCTTGTTAAGAATGCGAGTATCCGTCCAGTTTCTTCACGTTTTAAGATATTTATAGTTGATGAGTGCCAGTTGATCCTCGGGGAGACATGGGCAAGTCTTTTGAATAGCCTAGAGAGTTTTTCTCAATATGTTGTTTTTATTATGATCACTCCAGACTTAGACAAACTTCCCCGAAGTGCAGTTTCCAGGGCCCAGAAGTATCACTTCCCTAAGATAAAAGATGCTGACATTGCATGCAGATTGGAAAAAATTTGCATGGAAGAAGGTCTTGATTTTGAACAGGACGCTTTGGACTTCATCGCTGCAAAATCCTGTGGTTCACTTAGGGATGCAGAAATCATGCTTGATCAGCTGAGCTTGCTTGGTAAAAAAATCACAATTTCCTTAGCCTATGAGCTTACTGGGATCATTTCTGATGATGACTTGCTTGAATTACTGGATCTAGCTTTGTCTTCTGACACTTCAAATACAGTTAAAAGAGCGCGAGAGCTAATGAGATCAAGGGTGGATCCTCTGCAACTTACATCACATCTGGCAAATCTCATTATGGACATTCTTGCAGGGAAATGTAATGATGGTGGTTCTGAAGTCCGAATGAAGTTTTCAATTAGACATAAATCTGAACTGGAACTTCAAAAACTAAATCATGCATTGAGAATACTTTCTGAAACGGAGAAGCAATTACGAATTTCCAAGAATCAAACAACATGGTTCACGGTAGCTCTTCTACAGTTAAGCTCTGTAGAACATTCTTCTGTCGAAGCAAATGCTAAATTGAGAGATGCTTGCAACGGAGCTGGTGATTTCTGCAGTACATCATCTACAGGCGAAAGCAGGAAGCATCTAGCCTCTCCTTTGTATGATAACAAATTGTTTAGATTAGGACAACAAGATCACACATTGAGTTCCATATGGCATAAAGCGACGGAGTCATGTCAATCTAACAGACTCAAGACTTTTCTTAGGAAACAGGGGAAGTTGTCTTCACTCTGTGTTAATCACGGTCTAGCAATAGCTGAGTTGGATTTCCAGCATCGCAACTACGTATGTAGGGCTGAGAAGGCATGGAAATTGATAGCCAGTTCCCTGCAGCTCATATTGGGTTGTAACATAGAGCTCAGGATCAATCATGTCCCTTGTACTTCTCATTCTAAATATGCCAAATTGAAGAGGTCATCTTTCAGTTTTTTCAGTTGTTCCCGTAGAATCCATCGTAAAGCACTTTCAGATAATGAACAAGGAAGTGAACCAGGCCATACTGATCACACCTCACAGAAAGCCATGATGAAGGATAGAACTTTGACTTGTACATCTGATTGTGGATCTCAGATGCAGCAACCTGAGACTTATCATGGAATGGAGGTTGTAACAGCATTGAGAGATGGTGAAGGAAATTTGCTGAGCTCAAGGAAGAGTTTGTTGAATAGTTCATGTCAAGAGACTTCAAGGACCTCGAGTTCTGGGGTTGATTCCTCTAAGGAAGAGGGATTTGATTATGCACACCTAGTTTCATCAAACCCAGATTCAGACTATCAATCAAAATGTTTCCCTCGAACTTTCTGGATTCATAAGAAGAAGTCACCTTCTCCGGATCTATCTCCGGTTGTTTTCCAGGGCACTCAACAAGAGAAAGAATTTGTTCTATCTATCCCAAATTACACCTGTTCCGAGACATATAGCTACGCTAGTGAACCCTGTGTTTTCTCCGCTAGCCCTAACAACTGTACCAAACATGCCCAAAGTCAGAAGAGCCCGAAGTTGGACTCGGATTTGCTTTGTTGGAGAACCCCAAAATCTCCCTTGAGGAAGTCATGGCATGTGGGGCTCCAGCAACATAAGGCCCATCCGGCTGGGAGGTTTGTTTCCTGTGCCGCTGCTAAATAG 3036 0.417 MDGRRHSVDIPISKTLIALRRVRSLRDPSTNSMSKLCSSIDNLHWENNSGHGISLQFVDAPRACDSDDNGTSRSKNLSCSIRREHDATDFELNCAHFNSKLKSCPEGQQDEVLAYSNLNHEGNSGVKSTSDCCHSNHRRKELDVESIMPPSNEATSGSSKLGIVDHSKLTKKTLCKSQVKSSEVLGDIGGLSSPCLSVGEALSAYSSSANMNQDVDVVDNDHHGCGISCCWSKSPRLREANIYSDIEDRPLISWHTDETALYGNKNLRHIGGEISPNFGTPRSLCMKFRPKSFNDLVGQNVVARSLLGAISKGRVTSFYLFHGPRGTGKTSASRIFAAALNCLSFEEERPCGLCRECVLFFSGRSKDVKEVDSARINRIDKVKSLVKNASIRPVSSRFKIFIVDECQLILGETWASLLNSLESFSQYVVFIMITPDLDKLPRSAVSRAQKYHFPKIKDADIACRLEKICMEEGLDFEQDALDFIAAKSCGSLRDAEIMLDQLSLLGKKITISLAYELTGIISDDDLLELLDLALSSDTSNTVKRARELMRSRVDPLQLTSHLANLIMDILAGKCNDGGSEVRMKFSIRHKSELELQKLNHALRILSETEKQLRISKNQTTWFTVALLQLSSVEHSSVEANAKLRDACNGAGDFCSTSSTGESRKHLASPLYDNKLFRLGQQDHTLSSIWHKATESCQSNRLKTFLRKQGKLSSLCVNHGLAIAELDFQHRNYVCRAEKAWKLIASSLQLILGCNIELRINHVPCTSHSKYAKLKRSSFSFFSCSRRIHRKALSDNEQGSEPGHTDHTSQKAMMKDRTLTCTSDCGSQMQQPETYHGMEVVTALRDGEGNLLSSRKSLLNSSCQETSRTSSSGVDSSKEEGFDYAHLVSSNPDSDYQSKCFPRTFWIHKKKSPSPDLSPVVFQGTQQEKEFVLSIPNYTCSETYSYASEPCVFSASPNNCTKHAQSQKSPKLDSDLLCWRTPKSPLRKSWHVGLQQHKAHPAGRFVSCAAAK 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2756 1011 Gene3D - 457 519 - -
Prci4g2756 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 307 505 IPR027417 -
Prci4g2756 1011 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 285 688 - -
Prci4g2756 1011 SMART AAA_5 315 457 IPR003593 GO:0016887
Prci4g2756 1011 NCBIfam DNA polymerase III subunit gamma/tau 283 629 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Prci4g2756 1011 MobiDBLite consensus disorder prediction 792 812 - -
Prci4g2756 1011 CDD HLD_clamp_pol_III_gamma_tau 456 519 IPR045085 -
Prci4g2756 1011 FunFam DNA polymerase III subunit gamma/tau 457 519 - -
Prci4g2756 1011 Pfam DNA polymerase III, delta subunit 299 456 - -
Prci4g2756 1011 Gene3D - 280 454 IPR027417 -
Prci4g2756 1011 CDD AAA 297 447 - -
Prci4g2756 1011 Gene3D - 520 633 - -
Prci4g2756 1011 SUPERFAMILY post-AAA+ oligomerization domain-like 525 628 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2756 Prci-Chr4 39631223 39637083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2756 274 571 Core DNA Replication Machinery Family AT1G21690 23.625 1.75e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2756 - - pcin:129308301 1997.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2756 4 39631223 39637083 Prci4g2756 4 39631223 39637083 ECH