Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2750 ATGATAGCGGAACCCTATCAACTGGTTGGGTCTACTGTCACTGACCCCTTAGATGAATTCAAGAAGGCAGTTGTTTCCACCATTGAGGAATATTTCAGCACTGGTGATGTGGAATTAGCTGCCTCTGATCTCAGAGAACTTGGTTCAAGTGAATACTATCCATACTTCATCAAGCGTCTTGTGTCTATGGCCATGGATAGGCATGATAAAGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTGTATGCTGATGTAATTAGTCCTGCACAGATTAGGGATGGATTTTTTATGCTTCTCGAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCAGTTGACATCCTTGCTTTGTTTCTGGCTCGTGCTGTTGTTGATGATATCCTTCCTCCAGCCTTTCTTGCCAGGGCGAGAAAGGCACTTCCTGAGTCATCCAAGGGGGTTCAGATTATCCAGACTGCAGAGAAGAGTTATCTCTCAGCTCCACATCATGCAGAGCTTGTAGAGAGGCGGTGGGGCGGCAGCACTCACATTACTGTTGAAGAGGTAAAGAAGAAAATTGCTGATTTATTAAGAGAATATGTTGACAGTGGTGATACAGTTGAAGCCTGCAGGTGCATAAGGGAACTGGGGGTCTCATTCTTTCATCATGAGGTTGTGAAGAGGACTCTGGTACTTGCCATGGAGATCCATTCAGCAGAATCTTTAATGTTGAAGCTGCTAAAAGAAGCAGCAGAAGAAGGGCTCATTAGTTCCAGCCAAATGGTGAAGGGTTTTTCCCGTTTGGCAGAAGGTCTCGATGATCTTGCTCTCGATATTCCATCAGCTAAAACTTTGTTTCAATCATTGGTGCCCAGGGCAATATCTGAAGGATGGCTTGATGCTTCATTTTTGAAACCCTCTGGTGAAGATGGGGATATCCCAGTTGAAGATGAAAAGGTAAGAAACTACAAGAAAGAGGCAGTAACAATAATTCATGAGTATTTTCTCTCTGATGACATTCCTGAACTCATTCGGAGTCTTGAAGATCTTGGAGCACCTGAGTATAACCCTATATTTTTAAAGAAGCTAATTACTCTTGCTATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTTCATATAGAAATATTCTCGACGGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCTGAAGATACTGCACTGGATATATTGGATGCTTCCAATGAACTGGCCCTGTTTTTAGCTCGGGCTGTGATTGATGATGTGTTGGCCCCTCTGAATTTAGAAGAAATAGGCAGCAGGTTGCCACCAAAATGCAGTGGCAGTGAAACTGTGCGCATGGCTCGGTCACTCATTGCAGCTCGTCATGCAGGTGAGAGGCTGTTGAGATGTTGGGGCGGGGGTACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATAATGAAGCTCTTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAGGCATGCCAGTGCATTCGTGACCTCGGAATGCCTTTCTTTAACCATGAGGTTGTGAAGAAAGCTTTGGTCATGGCTATGGAGAAGAAGAATGATAGGATGCTGGATCTACTGCAGGAGTGCTTCAGTGAAGGTCTGATCACCATCAATCAGATGACCAAAGGGTTCACCCGTATCAAGGATGGTCTGGATGATCTGGCTCTGGACATTCCAAATGCAAGGGAGAAATTCAGCTTCTATGTGGATCACGCACTGAAGAAGGGCTGGCTCCTGCCTTCATTTGATTCTCCAGATGCCTGA 1797 0.4485 MIAEPYQLVGSTVTDPLDEFKKAVVSTIEEYFSTGDVELAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDILPPAFLARARKALPESSKGVQIIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVDSGDTVEACRCIRELGVSFFHHEVVKRTLVLAMEIHSAESLMLKLLKEAAEEGLISSSQMVKGFSRLAEGLDDLALDIPSAKTLFQSLVPRAISEGWLDASFLKPSGEDGDIPVEDEKVRNYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAREKFSFYVDHALKKGWLLPSFDSPDA 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2750 598 ProSiteProfiles MI domain profile. 183 304 IPR003891 -
Prci4g2750 598 Pfam MA3 domain 319 428 IPR003891 -
Prci4g2750 598 Pfam MA3 domain 184 295 IPR003891 -
Prci4g2750 598 Pfam MA3 domain 482 589 IPR003891 -
Prci4g2750 598 Pfam MA3 domain 20 131 IPR003891 -
Prci4g2750 598 FunFam Programmed cell death protein 4 169 304 - -
Prci4g2750 598 SUPERFAMILY ARM repeat 315 473 IPR016024 -
Prci4g2750 598 ProSiteProfiles MI domain profile. 480 598 IPR003891 -
Prci4g2750 598 FunFam Programmed cell death protein 4 466 596 - -
Prci4g2750 598 FunFam programmed cell death protein 4 11 162 - -
Prci4g2750 598 FunFam programmed cell death protein 4 307 461 - -
Prci4g2750 598 ProSiteProfiles MI domain profile. 19 140 IPR003891 -
Prci4g2750 598 ProSiteProfiles MI domain profile. 317 438 IPR003891 -
Prci4g2750 598 Gene3D - 468 595 - -
Prci4g2750 598 Gene3D - 170 301 - -
Prci4g2750 598 SUPERFAMILY ARM repeat 180 301 IPR016024 -
Prci4g2750 598 Gene3D - 12 160 - -
Prci4g2750 598 Gene3D - 309 461 - -
Prci4g2750 598 SMART ma3_7 318 429 IPR003891 -
Prci4g2750 598 SMART ma3_7 20 131 IPR003891 -
Prci4g2750 598 SMART ma3_7 481 590 IPR003891 -
Prci4g2750 598 SMART ma3_7 184 295 IPR003891 -
Prci4g2750 598 PANTHER PROGRAMMED CELL DEATH 4 5 594 IPR039778 GO:0045892
Prci4g2750 598 SUPERFAMILY ARM repeat 477 593 IPR016024 -
Prci4g2750 598 SUPERFAMILY ARM repeat 17 177 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2750 Prci-Chr4 39589442 39592633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2750 484 580 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 1.13e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2750 - - gmx:100815729 1077