Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2749 ATGAACCCACCGTTTAGTGTCATGAACACTTGTTTACTGATAAGAAGTGCAGAAACACACGGCCTGCACATGGTTTCTTTGAGGGCTTGGGCATTCCTTTTCCTAAAAATGGCTTCAGGTGAGGGATTTCTGACTGATGAGCAGAGAGAAATGCTAAAAGTGGCCAGCCATAATGTGGAAAATCTATCTTCATCTCCAAAATCTCCCACATCCTTTGTTGCTGACCATCACATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGATCACACTCTGGAAAGCTTGTGCGGGTGAAGAAGGATGGTGCTGGAGGTAAGGGAACCTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGACAGGAAAGACCCAAATTATGATAGCGGTGAGGAACCCTATCAACTGGTTGGGTCTACTGTCACTGACCCCTTAGATGAATTCAAGAAGGCAGTTGTTTCCACCATTGAGGAATATTTCAGCACTGGTGATGTGGAATTAGCTGCCTCTGATCTCAGAGAACTTGGTTCAAGTGAATACTATCCATACTTCATCAAGCGTCTTGTGTCTATGGCCATGGATAGGCATGATAAAGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTGTATGCTGATGTAATTAGTCCTGCACAGATTAGGGATGGATTTTTTATGCTTCTCGAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCAGTTGACATCCTTGCTTTGTTTCTGGCTCGTGCTGTTGTTGATGATATCCTTCCTCCAGCCTTTCTTGCCAGGGCGAGAAAGGCACTTCCTGAGTCATCCAAGGGGGTTCAGATTATCCAGACTGCAGAGAAGAGTTATCTCTCAGCTCCACATCATGCAGAGCTTGTAGAGAGGCGGTGGGGCGGCAGCACTCACATTACTGTTGAAGAGGTAAAGAAGAAAATTGCTGATTTATTAAGAGAATATGTTGACAGTGGTGATACAGTTGAAGCCTGCAGGTGCATAAGGGAACTGGGGGTCTCATTCTTTCATCATGAGGTTGTGAAGAGGACTCTGGTACTTGCCATGGAGATCCATTCAGCAGAATCTTTAATGTTGAAGCTGCTAAAAGAAGCAGCAGAAGAAGGGCTCATTAGTTCCAGCCAAATGGTGAAGGGTTTTTCCCGTTTGGCAGAAGGTCTCGATGATCTTGCTCTCGATATTCCATCAGCTAAAACTTTGTTTCAATCATTGGTGCCCAGGGCAATATCTGAAGGATGGCTTGATGCTTCATTTTTGAAACCCTCTGGTGAAGATGGGGATATCCCAGTTGAAGATGAAAAGGTAAGAAACTACAAGAAAGAGGCAGTAACAATAATTCATGAGTATTTTCTCTCTGATGACATTCCTGAACTCATTCGGAGTCTTGAAGATCTTGGAGCACCTGAGTATAACCCTATATTTTTAAAGAAGCTAATTACTCTTGCTATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTTCATATAGAAATATTCTCGACGGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCTGAAGATACTGCACTGGATATATTGGATGCTTCCAATGAACTGGCCCTGTTTTTAGCTCGGGCTGTGATTGATGATGTGTTGGCCCCTCTGAATTTAGAAGAAATAGGCAGCAGGTTGCCACCAAAATGCAGTGGCAGTGAAACTGTGCGCATGGCTCGGTCACTCATTGCAGCTCGTCATGCAGGTGAGAGGCTGTTGAGATGTTGGGGCGGGGGTACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATAATGAAGCTCTTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAGGCATGCCAGTGCATTCGTGACCTCGGAATGCCTTTCTTTAACCATGAGGTTGTGAAGAAAGCTTTGGTCATGGCTATGGAGAAGAAGAATGATAGGATGCTGGATCTACTGCAGGAGTGCTTCAGTGAAGGTCTGATCACCATCAATCAGATGACCAAAGGGTTCACCCGTATCAAGGATGGTCTGGATGATCTGGCTCTGGACATTCCAAATGCAAGGGAGAAATTCAGCTTCTATGTGGATCACGCACTGAAGAAGGGCTGGCTCCTGCCTTCATTTGATTCTCCAGATGCCTGA 2211 0.4509 MNPPFSVMNTCLLIRSAETHGLHMVSLRAWAFLFLKMASGEGFLTDEQREMLKVASHNVENLSSSPKSPTSFVADHHIKAPAGSKAQTAGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGESHIDRKDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSTIEEYFSTGDVELAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDILPPAFLARARKALPESSKGVQIIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVDSGDTVEACRCIRELGVSFFHHEVVKRTLVLAMEIHSAESLMLKLLKEAAEEGLISSSQMVKGFSRLAEGLDDLALDIPSAKTLFQSLVPRAISEGWLDASFLKPSGEDGDIPVEDEKVRNYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAREKFSFYVDHALKKGWLLPSFDSPDA 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2749 736 SUPERFAMILY ARM repeat 318 439 IPR016024 -
Prci4g2749 736 Gene3D - 308 439 - -
Prci4g2749 736 Gene3D - 606 733 - -
Prci4g2749 736 ProSiteProfiles MI domain profile. 455 576 IPR003891 -
Prci4g2749 736 SUPERFAMILY ARM repeat 155 315 IPR016024 -
Prci4g2749 736 ProSiteProfiles MI domain profile. 321 442 IPR003891 -
Prci4g2749 736 SUPERFAMILY ARM repeat 453 611 IPR016024 -
Prci4g2749 736 Gene3D - 447 598 - -
Prci4g2749 736 Gene3D - 150 298 - -
Prci4g2749 736 SMART ma3_7 158 269 IPR003891 -
Prci4g2749 736 SMART ma3_7 456 567 IPR003891 -
Prci4g2749 736 SMART ma3_7 322 433 IPR003891 -
Prci4g2749 736 SMART ma3_7 619 728 IPR003891 -
Prci4g2749 736 FunFam programmed cell death protein 4 149 300 - -
Prci4g2749 736 Pfam MA3 domain 457 566 IPR003891 -
Prci4g2749 736 Pfam MA3 domain 620 727 IPR003891 -
Prci4g2749 736 Pfam MA3 domain 158 269 IPR003891 -
Prci4g2749 736 Pfam MA3 domain 322 433 IPR003891 -
Prci4g2749 736 PANTHER PROGRAMMED CELL DEATH 4 39 732 IPR039778 GO:0045892
Prci4g2749 736 FunFam Programmed cell death protein 4 307 442 - -
Prci4g2749 736 SUPERFAMILY ARM repeat 615 731 IPR016024 -
Prci4g2749 736 ProSiteProfiles MI domain profile. 157 278 IPR003891 -
Prci4g2749 736 ProSiteProfiles MI domain profile. 618 736 IPR003891 -
Prci4g2749 736 FunFam programmed cell death protein 4 445 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2749 Prci-Chr4 39589442 39593685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2749 622 725 Eukaryotic Initiation Factors Gene Family AT5G57870 30.841 7.09e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2749 - - gmx:100809081 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2749 4 39589442 39593685 Prci4g2749 4 39589442 39593685 ECH