Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2748 ATGGCTTCAGGTGAGGGATTTCTGACTGATGAGCAGAGAGAAATGCTAAAAGTGGCCAGCCATAATGTGGAAAATCTATCTTCATCTCCAAAATCTCCCACATCCTTTGTTGCTGACCATCACATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGATCACACTCTGGAAAGCTTGTGCGGGTGAAGAAGGATGGTGCTGGAGGTAAGGGAACCTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGACAGGAAAGACCCAAATTATGATAGCGGTGAGGAACCCTATCAACTGGTTGGGTCTACTGTCACTGACCCCTTAGATGAATTCAAGAAGGCAGTTGTTTCCACCATTGAGGAATATTTCAGCACTGGTGATGTGGAATTAGCTGCCTCTGATCTCAGAGAACTTGGTTCAAGTGAATACTATCCATACTTCATCAAGCGTCTTGTGTCTATGGCCATGGATAGGCATGATAAAGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTGTATGCTGATGTAATTAGTCCTGCACAGATTAGGGATGGATTTTTTATGCTTCTCGAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCAGTTGACATCCTTGCTTTGTTTCTGGCTCGTGCTGTTGTTGATGATATCCTTCCTCCAGCCTTTCTTGCCAGGGCGAGAAAGGCACTTCCTGAGTCATCCAAGGGGGTTCAGATTATCCAGACTGCAGAGAAGAGTTATCTCTCAGCTCCACATCATGCAGAGCTTGTAGAGAGGCGGTGGGGCGGCAGCACTCACATTACTGTTGAAGAGGTAAAGAAGAAAATTGCTGATTTATTAAGAGAATATGTTGACAGTGGTGATACAGTTGAAGCCTGCAGGTGCATAAGGGAACTGGGGGTCTCATTCTTTCATCATGAGGTTGTGAAGAGGACTCTGGTACTTGCCATGGAGATCCATTCAGCAGAATCTTTAATGTTGAAGCTGCTAAAAGAAGCAGCAGAAGAAGGGCTCATTAGTTCCAGCCAAATGGTGAAGGGTTTTTCCCGTTTGGCAGAAGGTCTCGATGATCTTGCTCTCGATATTCCATCAGCTAAAACTTTGTTTCAATCATTGGTGCCCAGGGCAATATCTGAAGGATGGCTTGATGCTTCATTTTTGAAACCCTCTGGTGAAGATGGGGATATCCCAGTTGAAGATGAAAAGGTAAGAAACTACAAGAAAGAGGCAGTAACAATAATTCATGAGTATTTTCTCTCTGATGACATTCCTGAACTCATTCGGAGTCTTGAAGATCTTGGAGCACCTGAGTATAACCCTATATTTTTAAAGAAGCTAATTACTCTTGCTATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTTCATATAGAAATATTCTCGACGGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCTGAAGATACTGCACTGGATATATTGGATGCTTCCAATGAACTGGCCCTGTTTTTAGCTCGGGCTGTGATTGATGATGTGTTGGCCCCTCTGAATTTAGAAGAAATAGGCAGCAGGTTGCCACCAAAATGCAGTGGCAGTGAAACTGTGCGCATGGCTCGGTCACTCATTGCAGCTCGTCATGCAGGTGAGAGGCTGTTGAGATGTTGGGGCGGGGGTACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATAATGAAGCTCTTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAGGCATGCCAGTGCATTCGTGACCTCGGAATGCCTTTCTTTAACCATGAGGTTGTGAAGAAAGCTTTGGTCATGGCTATGGAGAAGAAGAATGATAGGATGCTGGATCTACTGCAGGAGTGCTTCAGTGAAGGTCTGATCACCATCAATCAGATGACCAAAGGGTTCACCCGTATCAAGGATGGTCTGGATGATCTGGCTCTGGACATTCCAAATGCAAGGGAGAAATTCAGCTTCTATGTGGATCACGCACTGAAGAAGGGCTGGCTCCTGCCTTCATTTGATTCTCCAGATGCCTGA 2103 0.4517 MASGEGFLTDEQREMLKVASHNVENLSSSPKSPTSFVADHHIKAPAGSKAQTAGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGESHIDRKDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSTIEEYFSTGDVELAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDILPPAFLARARKALPESSKGVQIIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVDSGDTVEACRCIRELGVSFFHHEVVKRTLVLAMEIHSAESLMLKLLKEAAEEGLISSSQMVKGFSRLAEGLDDLALDIPSAKTLFQSLVPRAISEGWLDASFLKPSGEDGDIPVEDEKVRNYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAREKFSFYVDHALKKGWLLPSFDSPDA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2748 700 SUPERFAMILY ARM repeat 282 403 IPR016024 -
Prci4g2748 700 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Prci4g2748 700 ProSiteProfiles MI domain profile. 582 700 IPR003891 -
Prci4g2748 700 MobiDBLite consensus disorder prediction 86 103 - -
Prci4g2748 700 FunFam programmed cell death protein 4 409 563 - -
Prci4g2748 700 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Prci4g2748 700 PANTHER PROGRAMMED CELL DEATH 4 3 696 IPR039778 GO:0045892
Prci4g2748 700 FunFam programmed cell death protein 4 113 264 - -
Prci4g2748 700 Pfam MA3 domain 122 233 IPR003891 -
Prci4g2748 700 Pfam MA3 domain 421 530 IPR003891 -
Prci4g2748 700 Pfam MA3 domain 286 397 IPR003891 -
Prci4g2748 700 Pfam MA3 domain 584 691 IPR003891 -
Prci4g2748 700 SMART ma3_7 420 531 IPR003891 -
Prci4g2748 700 SMART ma3_7 122 233 IPR003891 -
Prci4g2748 700 SMART ma3_7 583 692 IPR003891 -
Prci4g2748 700 SMART ma3_7 286 397 IPR003891 -
Prci4g2748 700 Gene3D - 114 262 - -
Prci4g2748 700 Gene3D - 411 563 - -
Prci4g2748 700 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Prci4g2748 700 SUPERFAMILY ARM repeat 579 695 IPR016024 -
Prci4g2748 700 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Prci4g2748 700 Gene3D - 272 403 - -
Prci4g2748 700 Gene3D - 570 697 - -
Prci4g2748 700 MobiDBLite consensus disorder prediction 80 106 - -
Prci4g2748 700 SUPERFAMILY ARM repeat 417 575 IPR016024 -
Prci4g2748 700 FunFam Programmed cell death protein 4 271 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2748 Prci-Chr4 39589442 39593685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2748 586 689 Eukaryotic Initiation Factors Gene Family AT5G57870 30.841 5.70e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2748 - - gmx:100809081 1241.87