Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2743 ATGGCGGGTTCGGCAGCTCTGGCACCAGAGCCAAACGCAGAGGTATTTTCGTGGCTAAAATCTCTTCCTCTCGCTCCAGAGTACCGACCTAGCTTGGCTGAGTTCCAAGATCCGATTTCATACATTTTTAAGATCGAGAAGGAAGCTTCCAAGTATGGAATCTGCAAAATTGTTCCCCCCGTGCCGCCTTCTTCCAAAAAGACAGCAATTGCGAATTTTAATCGCTCGCTGGCGGCACGAGCTGCTTCTTCTGACTCTTCCAATTCGAAGTCTCAGCCTACATTCACCACAAGGCAGCAGCAGATCGGGTTCTGCCCTCGGAAGCAACGGCCCGTGCAGCGTCCTGTGTGGCAGAGTGGGGAATACTACACGTTTCAGGAATTTGAAGCTAAGGCCAAGGCTTTTGAGAAGAATTATCTGAAGAAATGGGCTAAGAAAGGTGGGCTCTCGCCCCTGGAGATAGAAACACTTTACTGGAAGGCGACAGTAGACAAACCCTTTTCGGTGGAGTACGCAAATGATATGCCTGGTTCGGCTTTTGTTCCCGTGAATGGGAGAAAATATAGAGAGGCAGGGGAGGGATTGACTCTTGCTGAGACTGCATGGAACATGAGGGGGGTGTCGCGGACAAATGGCTCTCTGTTGAAGTTTATGAAGGAGGAGATTCCAGGTGTTACATCACCGATGGTGTACGTAGCTATGCTGTTCAGCTGGTTTGCTTGGCATGTAGAGGATCATGACCTGCATAGCTTGAATTACCTTCATATGGGGGCAGGCAAGACTTGGTATGGCGTGCCGCGGGATGCAGCTGTTGCATTTGAGGAAGTGGTCAGAGTACATGGGTATGGAGGAGAAATAAATCCTCTTGTTACTTTTGCTGTACTTGGTGAGAAAACGACAGTGATGTCACCAGAAGTATTTCTTAGTGCAGGGGTTCCATGTTGCAGGTTAGTGCAAAATGCTGGAGAATTTGTTGTCACATTTCCAAGAGCCTATCACACGGGATTTAGTCATGGATTTAATTGCGGGGAGGCTGCCAATATTGCAACACCTGAATGGTTGAGGGTTGCTAAAGATGCTGCTATTAGGAGGGCTTCAATAAATTATCCGCCCATGGTTTCACATTTCCAGTTACTTTATGATCTTGCCTTGGCCTTGTGTTCAAGAATTCCTGGGGGCATCAGTTCTGAACCACGGAGTTCTCGGCTTAGAGATAAGAGGAAAAGTGAAGGGGAAATTGTAATTAAAGAACTATTTGTCCAAGATGTGTTACAGAACAATGACTTGCTTCATGGTCTTGGTAAAGGATCTTCTATAGTACTGCTTCCACGGAGCTCTTCAGATATTTCTGTTTGCTCAAAATTACGTGTTGGTTCCCAGCAATTTAAGGTGAACCCTGGGTATTCTCCTGGTGCATGTAATTCTGAGGGAGTGAATTCCTCAAAAGGTTTTGTTTCTGAAGACCTGGTTTTCAGCAGAACCACACAAATGAAAGGATTTTATTCAGTAAAAGAGAAGTTTGCTTCTTTGTGTGAGAGGAACAGACTGTCCTCGTTAAGTGCAAATGATAACATATGCTCTTCAAGTTCTGTGCCACTTCAAAGAGACACTGAAAGAGAGACAAGCCAAGGGGATGGGTTGTCAGACCAGAGACTATTTTCATGTGTCACTTGTGGCATATTAAGCTTTGCTTGTGTTGCTATTGTGCAGCCTAGGGAACCAGCGGCTAGATACCTTATGTCAGCTGATTGTAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTAAGCTTCAATAAGTTTACTCATGTTCAGGGAGATGCAACTACTGAAAAAAACATCTTTGCAGGATGGAAGGTTGAAAAAGCCCCAGACTATGATATTCCTGTTCAATCTGTAGGATATCAGATACAGGCGGAAGATCAATCACATGAGGAAGCTTTATGTACTAAGGGACGAAAGGAAACATCAGCCCTTGGGTTATTGGCATCAGCATATGGAAATTCATCTGATTCAGAGGAAGATCATGTTGACTCAGATATTGCCGTTCATCATAATGAATCTAATATTATGAACTGTCCATCAGGGAGTGTATCTCAGAATATGTCTTGCTTGCCTTCTCATTTCGAAGACTGCAAGGCAAGTGCAGTCAGGGTTCATGATGATCATGGGCAAAAAGCAAACTCAGAAGGTCGTGGTACCACTTCAGGGACTGCATTTAAGAATACGAGTTGTACCTTAAATTATTCTCAAGATGTTTGTGAGGCTGAAACATCAATGCTTCGTAACACTGGATGTCCCGTTGATAATAGAAGTGGTTCATTGTTGCCACATTCTGATGAAGATTCATCTAGATTGCATGTCTTCTGTCTAGAGCATGCTGCTGAAGTGGAGCAGCAACTTCACCCAATAGGAGGAGCAGACATTTTACTCCTTTGTCATCCAGATTATCCCAAGGTGGAGGCTGAAGCGAAAATTGTGGCCGAAGAACTTGGTATTGATGGCATATGGAAGAATCTTGCTTACAGAAATGCCACCCCTGAAGATGAGGAAAGGATCCAGTCGGCTCTGGATAGTGAGGAAGCTATTCCTGGAAATGGAGACTGGGCTGTCAAGCTGGGAATCAATCTCTTCTACAGTGCCAATCTTAGCCGCTCTCCTCTCTACAGTAAGCAGATGCCTTATAATTCTGTCATATATTATGCATTTGGCCGTAGTTCTCTGGCAGGCTCGCCCACAGAACCCAAGGTTTACCAAAGAAGGGCCAGCAAGCAGAAAAAGGTGGTTGCTGGAAAATGGTGTGGTAAAGTTTGGATGTCCAATCAGGTCCACCCCCTTTTAGCTAAAAGAGATTCTGAGGATGATGATGAGAAGATCTTGCATGGGTGGTCATTGCCTGACACGAAAATTGAGAGATCAGAAAGTACCCACACAGACAATTTTACTACTAGAAAATCTGCTAAGAAAAGGAAAATGACTGTAGAGAGTAGAAAAGCCAGGAAAGCCAGTTTCACTGGGAGAGAATATGTTTCAGACAATTCTATTGAAGAGAAATACAACCCACAGCAGAAGACATATTCTAGAAGCAAACAAGCCAAATATTTTGAGAGAGATGATGCAGCATCAGAAGAGGATTATTCTCCTTTGCAGCAGTACGGAAAACCTACAAGAAAGCAAGCCAAATACATCGACAGTGATGAAGTTTCAGATGATTCAATGGATGATAATTCTCATATGCAGCATGGAAGGAATTTCAAAGTCAGAGAAACTAAATTTAGTGACAGTGATGTTGCCTCAGATGATACAATGGGATATGATTCTGATTCACAGCTTAGGAGAGGGCTTAGCAAGAAACAAATTGAAGACTCAGAAAGAGATGGAATTTCAGAGGATTCAATGGGTGGTAGTTCTCTTAAGCGGCAGAGGAAGAATCGTAAAAGCAAGCCAGCCAAATATGTTGCTAAAGATGTAATTTCTGATGACCAAATGGAGGACCATTTTCAGAAGCAGCAAAGAAGGATTCCTAAAAGCAGACAAGCGAAATACCTTGATGGAGAAGATATCATGGTATCTGATGACGAACTGGAGCATCACATACATAAGCAGCAACGATCTAAAGGCAGGCGAACCAAATACCTTGCTGGCGAGGACATTACATCTGATGACCTACTGGAGGACCATTCTGGCAAGTGTCATAGAAGGTTTCCTAAAAGCAGACAAGGTAAATGCCTAGTTCAGGAAGATGTAGTGTCTGATGATCAATTGGACGATCACTTTCAGAAGCCACGTGGGACTATTCCAAAGAGCAGGCACAATAAACGCAAAAATAGAGTTACTGTTGACTCATCTGATAACTATTCTCGTTTGATGCATAGAACTCCTAAGAGGAAAGTGAAAAGCATGGGTGAAGAAGATATCAATTCCGATGATCAAATGGAGGATTCATCTCATCAGCAGCGAAGGAGGATTCTTCGAAGCCAGCAATCTAAATTAGAGACACAGCAAGAATCGAAACAATCTAACTCTTGCCGTGTGAAAGAACATGCATCCCGGCCTCGAAAACGAGGTGCTCAGCTGCTTGTAAAACCGAAGACTTCTCAGAAAATGAAGCAGCCACCTCGAGTGCAGAGAAATCAACCTAATAACTTTAGAGATTTTAACCTATGTTCGGAAGAGGAGGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGTACCAAAAGTTGAGGAGCCTGAAGCAAAACCCAAAGAAAAGGTAACCCAAAGGAAGAAGGTGAACAATGCTACAGCTTTGAAGGTTTCCAAAACGAAGGATGAGGAAGCAGAATATGAGTGTGATATTGATGGTTGCACTATGAGCTTTGGCTCAAAACAGGAGCTATTAGTTCACAAGAGGAACATTTGTCCTGTAAAGGGATGTGGAAAGAAATTTTTCTCACATAAATATCTGGTACAGCATCGTCGGGTTCACGAGGATGACCGCCCTCTGAGGTGCCCTTGGAAGGGCTGCAAGATGACCTTCAAGTGGGCATGGGCACGTACTGAACATATTCGAGTGCATACAGGGGCTCGTCCATACGTTTGCGCTGAGCCGGGGTGTGGGCAAACATTCAGATTTGTTTCTGATTTCAGTCGCCACAAGCGAAAGACCGGTCATTCAGCAAAGAAGAGCCGTTAA 4680 0.44 MAGSAALAPEPNAEVFSWLKSLPLAPEYRPSLAEFQDPISYIFKIEKEASKYGICKIVPPVPPSSKKTAIANFNRSLAARAASSDSSNSKSQPTFTTRQQQIGFCPRKQRPVQRPVWQSGEYYTFQEFEAKAKAFEKNYLKKWAKKGGLSPLEIETLYWKATVDKPFSVEYANDMPGSAFVPVNGRKYREAGEGLTLAETAWNMRGVSRTNGSLLKFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAVLGEKTTVMSPEVFLSAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCSRIPGGISSEPRSSRLRDKRKSEGEIVIKELFVQDVLQNNDLLHGLGKGSSIVLLPRSSSDISVCSKLRVGSQQFKVNPGYSPGACNSEGVNSSKGFVSEDLVFSRTTQMKGFYSVKEKFASLCERNRLSSLSANDNICSSSSVPLQRDTERETSQGDGLSDQRLFSCVTCGILSFACVAIVQPREPAARYLMSADCSFFNDWVVGSGVSFNKFTHVQGDATTEKNIFAGWKVEKAPDYDIPVQSVGYQIQAEDQSHEEALCTKGRKETSALGLLASAYGNSSDSEEDHVDSDIAVHHNESNIMNCPSGSVSQNMSCLPSHFEDCKASAVRVHDDHGQKANSEGRGTTSGTAFKNTSCTLNYSQDVCEAETSMLRNTGCPVDNRSGSLLPHSDEDSSRLHVFCLEHAAEVEQQLHPIGGADILLLCHPDYPKVEAEAKIVAEELGIDGIWKNLAYRNATPEDEERIQSALDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYAFGRSSLAGSPTEPKVYQRRASKQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDDDEKILHGWSLPDTKIERSESTHTDNFTTRKSAKKRKMTVESRKARKASFTGREYVSDNSIEEKYNPQQKTYSRSKQAKYFERDDAASEEDYSPLQQYGKPTRKQAKYIDSDEVSDDSMDDNSHMQHGRNFKVRETKFSDSDVASDDTMGYDSDSQLRRGLSKKQIEDSERDGISEDSMGGSSLKRQRKNRKSKPAKYVAKDVISDDQMEDHFQKQQRRIPKSRQAKYLDGEDIMVSDDELEHHIHKQQRSKGRRTKYLAGEDITSDDLLEDHSGKCHRRFPKSRQGKCLVQEDVVSDDQLDDHFQKPRGTIPKSRHNKRKNRVTVDSSDNYSRLMHRTPKRKVKSMGEEDINSDDQMEDSSHQQRRRILRSQQSKLETQQESKQSNSCRVKEHASRPRKRGAQLLVKPKTSQKMKQPPRVQRNQPNNFRDFNLCSEEEEEGGPSTRLRKRVPKVEEPEAKPKEKVTQRKKVNNATALKVSKTKDEEAEYECDIDGCTMSFGSKQELLVHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLRCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKSR 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2743 1559 FunFam Probable lysine-specific demethylase ELF6 1494 1523 - -
Prci4g2743 1559 ProSitePatterns Zinc finger C2H2 type domain signature. 1469 1491 IPR013087 -
Prci4g2743 1559 Gene3D Cupin 18 369 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 81 104 - -
Prci4g2743 1559 FunFam Probable lysine-specific demethylase ELF6 18 369 - -
Prci4g2743 1559 ProSitePatterns Zinc finger C2H2 type domain signature. 1499 1521 IPR013087 -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1387 1423 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1249 1264 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1111 1129 - -
Prci4g2743 1559 ProSiteProfiles JmjN domain profile. 25 66 IPR003349 -
Prci4g2743 1559 ProSiteProfiles Zinc finger C2H2 type domain profile. 1497 1526 IPR013087 -
Prci4g2743 1559 ProSiteProfiles JmjC domain profile. 199 365 IPR003347 -
Prci4g2743 1559 ProSitePatterns Zinc finger C2H2 type domain signature. 1529 1553 IPR013087 -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1059 1096 - -
Prci4g2743 1559 SMART JmjN_1 24 65 IPR003349 -
Prci4g2743 1559 Gene3D Classic Zinc Finger 1417 1467 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 971 1179 - -
Prci4g2743 1559 PANTHER LYSINE-SPECIFIC DEMETHYLASE 17 1493 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1369 1386 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1030 1044 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1007 1029 - -
Prci4g2743 1559 SMART cupin_9 196 365 IPR003347 -
Prci4g2743 1559 SUPERFAMILY beta-beta-alpha zinc fingers 1507 1551 IPR036236 -
Prci4g2743 1559 SMART c2h2final6 1527 1553 IPR013087 -
Prci4g2743 1559 SMART c2h2final6 1444 1466 IPR013087 -
Prci4g2743 1559 SMART c2h2final6 1497 1521 IPR013087 -
Prci4g2743 1559 SMART c2h2final6 1467 1491 IPR013087 -
Prci4g2743 1559 ProSiteProfiles Zinc finger C2H2 type domain profile. 1467 1496 IPR013087 -
Prci4g2743 1559 SUPERFAMILY Clavaminate synthase-like 211 379 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1288 1327 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 971 989 - -
Prci4g2743 1559 Pfam JmjC domain, hydroxylase 229 347 IPR003347 -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1222 1423 - -
Prci4g2743 1559 MobiDBLite consensus disorder prediction 1150 1179 - -
Prci4g2743 1559 SUPERFAMILY beta-beta-alpha zinc fingers 1467 1503 IPR036236 -
Prci4g2743 1559 ProSiteProfiles Zinc finger C2H2 type domain profile. 1527 1558 IPR013087 -
Prci4g2743 1559 Pfam jmjN domain 26 59 IPR003349 -
Prci4g2743 1559 Gene3D Classic Zinc Finger 1468 1551 - -
Prci4g2743 1559 FunFam Probable lysine-specific demethylase ELF6 1524 1553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2743 Prci-Chr4 39554972 39564843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2743 1126 1558 C2H2 Transcription Factor Family AT3G48430 36.478 2.35e-69 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci4g2743 JmjC 9.8e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2743 - - gmx:100775813 1966.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2743 4 39554972 39564843 Prci4g2743 4 39554972 39564843 ECH