Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2736 ATGAGAGAAGCGTGTGTGGACTGTGCCCAGAAATGTCTTTCGATTCACGGAAAGGAGAAAACATATTCAAATGTTCCTTCTTCCTTCTTCAAGGTCATGATTGGCGGCGATTTTTCTAGAGTTTTGTATCTGCCTCCTAAGTTTGGTCCTACAGCTTCGGCCTTGGTTGATAAAGAAGCCATTATTGAGGATTCAAGTGGACATGAATGGACGGTTCGAGTATCAATTGTTAACAATTCTTATGCTTTTCAGGAGGGATGGAAGAGTTTTTCGTCGAAGCATGGGCTTGAAATTGGAAGCTTTTTGGTGTTCCATTATATTGGAAGATCGCACTTTGTTGTTAAGATTTTTGATAAATCTGGGTGTGAAAAGATTGATTTTCCCTATCAGAGAAAGCAGAAGAAGAGAAAAACTTGCCTGATTGACCTTGACGGTAGTGAGGAATTGTTGAATAGACAAGGTTTATCCTCGGAGTCAGGCACGGAAAAAATGCAAAGCCATGTCGAGGTTGTCGGAGTGAACAGTGCAGAAATTAACGAAGGGAACACTTCAGGGAACAGTAATAGTAATGGGAGGATCCGATCTTTATACGAGGTCAATAACTATGAAGACCCTTGTTACTTGACAGACCGAGACTTTGGAGACAAAGAAAGAGAGGAGAGGAGTCACGTGTTTGATGCGTTGAGGTATGAAATAGTGAACAATTCAGGTATTCACACGACTGGCAAATTTACAAGCAGCAATGAGATAGTTGATGCAAGCATCTATACCAAAGATCCTTTGCTTGAAGAGATGTTGGGTATTGGAGCAACTCAAGATCCATTTGAAGTTGAATTAACTAGAAGTCATTTTCTTGAAGAGCTAGACAAGAGTACACTCTCCCATGAGAGACATTATTGTGGAAGAAAGATTCCTGAGAATCTTTTGATTGCATATACCATGAAACATGAAGAAATCAAAGAGAACAATGCCATTAAGCCCTACCGGGAAGACCAAAAGTGCCAATTTGCTGAGAACTCAGGGACCGATCAATCGATATCGAAAGAAGAATATCCTTGGCACATTGGCAATTGTCAAAGCAGAGAAGACATGATGGTTGGGTTCCATGTGGCCCTGGATGCTCCTATCTGCCATGCGGAAATGGGGAGAATGGTTCAAAAAGACCTTCCGGACATGACTCCAGATGTGCGTAGTCACAATGATCAGCTCCAGTCAATCATTGGAGATCAAGGCAGCAGTCTCAATTCAGTGAAAGCTGAACCATCTGTGGACTGA 1275 0.4188 MREACVDCAQKCLSIHGKEKTYSNVPSSFFKVMIGGDFSRVLYLPPKFGPTASALVDKEAIIEDSSGHEWTVRVSIVNNSYAFQEGWKSFSSKHGLEIGSFLVFHYIGRSHFVVKIFDKSGCEKIDFPYQRKQKKRKTCLIDLDGSEELLNRQGLSSESGTEKMQSHVEVVGVNSAEINEGNTSGNSNSNGRIRSLYEVNNYEDPCYLTDRDFGDKEREERSHVFDALRYEIVNNSGIHTTGKFTSSNEIVDASIYTKDPLLEEMLGIGATQDPFEVELTRSHFLEELDKSTLSHERHYCGRKIPENLLIAYTMKHEEIKENNAIKPYREDQKCQFAENSGTDQSISKEEYPWHIGNCQSREDMMVGFHVALDAPICHAEMGRMVQKDLPDMTPDVRSHNDQLQSIIGDQGSSLNSVKAEPSVD 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2736 424 Gene3D - 23 122 IPR015300 -
Prci4g2736 424 SMART B3_2 29 120 IPR003340 GO:0003677
Prci4g2736 424 SUPERFAMILY DNA-binding pseudobarrel domain 27 122 IPR015300 -
Prci4g2736 424 CDD B3_DNA 28 118 IPR003340 GO:0003677
Prci4g2736 424 PANTHER B3 DOMAIN-CONTAINING 26 171 - -
Prci4g2736 424 Pfam B3 DNA binding domain 29 119 IPR003340 GO:0003677
Prci4g2736 424 ProSiteProfiles B3 DNA-binding domain profile. 27 120 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2736 Prci-Chr4 39459378 39462696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2736 29 124 B3 DNA Binding Superfamily AT5G66980 38.000 5.67e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci4g2736 B3 2.6e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2736 - - pcin:129308262 846.654