Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2727 ATGGCTCCTCCGTATAGAGCCCTCACAGGCCATTTAAGTGATAATAATGATCATAATCCTATGATAGGCCTTGGCTTTTATAATTCCTCTGTTGGCTGCGTTGCCTATCCTCATTTACTCCCTGTTTTTGAAACCAGAACTTCTCCTCCGCCTTGGACCCTTCCATTTTCTGATAAAACCAATGGAAACAATAAGAGGTTGAAGAAATCTCCAAGCATCCCAGAAGTTCTTGGAGATTATAGAAGCATTTCTTCAAGCAGTGGAAGTGAAGATTGTTATAGCAGTCTCAGCAGAAGCAACAGTGTGATTAGCCTTCCAAAGCTCCATTTCAGAGACCACATATGGACTATTACTCAGAGATATCTTGCTTCTGAAGAGGCAGCACAGAAAGACATGACCTATCCTGAGGCAACTGAAGCTGAAGAACGAGATGGGAATTGTGCTGATGGGATGAGACTTGTTCAGCTTCTTGTTCATTGTGCTGAAGGTGTGGCTTGTCGTGACAAGTCACATTCTTCAATTTTACTATCTGAACTGAGATCAAATGCATTGGTCTTTGGCTCACCCTTTCAGCGAGTGGCTTCTTGTTTTGTCCAAGGGCTAGCTGATCGGCTCGCAATGGTTGAATCGATTGGGGCTGTGGGGAATATGGAACCGATGATGAATATTATGGACATAGCCTCAGAAGAAACGGAAGAAGCACTTAAATTGGTTTTTGAGATTTGCCCACACATTAAGTTTGGTCACTTTGTAGCTAATGCCACAATATTGGAAGCCTTTGACAACCACAGTTTTGTGCATGTGGTGGACCTTGGGATGACTCTTGGTCTTCCCCATGGTCACCAATGGAGGGGACTAATTCAGAGCCTGGCTAACCGCCCGGGCCAGCCTATTCGGCACCTTCGAATTACAGGGGTTGGCCTTTGTGTTGAGAAACTCAAACTGATTGGTGAGGAACTTGAACTTTATGCTCATAACTTGGGGATTAACCTGGAGTTCTCAGTGGTGGGAAAGAACTTAGAAAAATTGCAAATTGATGACATCAAGGTGAATGATGAGGAGGTTGTTGTGGTTAATAGCATTCTTCAGTTGCATTGTGTTGTAAAAGAGAGTCGTGGGGCTTTAAACTCTGTGCTTCAGATGATTCATAAGCTCTCACCAAAAGTTTTGGTTATGGTTGAGCAGGACTCAAGCCATAATGGACCCTTTTTCCTTGGGAGGTTCATGGAAGCACTTCATTATTACTCTGCCATTTTTGACTCTCTGGATGCTATGTTGCCTAAGTATGACACTAAGAGAGCAAAAATAGAACAGTTCTATTTTGCAGAGGAGATAAAGAACATTGTCAGTTGCGAGGGACCAGCGAGGGTGGAGAGGCACGAGAGGTTAGACCAGTGGCGACGGAGGATGAGTAGGGCTGGGTTTCAAGGTGCACCTGTGAAGATGGTGAGTCAAGCCAAGCAGTGGCTTCAGAAGAATCAGGTTTGTGATGGCTACACTGTTGTGGAGGAGAAAGGTTGCTTGGTCCTTGGGTGGCAATCAAAGCCAATTGTTGCAGCTTCTTGCTGGAAATGCTGA 1578 0.4461 MAPPYRALTGHLSDNNDHNPMIGLGFYNSSVGCVAYPHLLPVFETRTSPPPWTLPFSDKTNGNNKRLKKSPSIPEVLGDYRSISSSSGSEDCYSSLSRSNSVISLPKLHFRDHIWTITQRYLASEEAAQKDMTYPEATEAEERDGNCADGMRLVQLLVHCAEGVACRDKSHSSILLSELRSNALVFGSPFQRVASCFVQGLADRLAMVESIGAVGNMEPMMNIMDIASEETEEALKLVFEICPHIKFGHFVANATILEAFDNHSFVHVVDLGMTLGLPHGHQWRGLIQSLANRPGQPIRHLRITGVGLCVEKLKLIGEELELYAHNLGINLEFSVVGKNLEKLQIDDIKVNDEEVVVVNSILQLHCVVKESRGALNSVLQMIHKLSPKVLVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERLDQWRRRMSRAGFQGAPVKMVSQAKQWLQKNQVCDGYTVVEEKGCLVLGWQSKPIVAASCWKC 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2727 525 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 127 519 IPR005202 -
Prci4g2727 525 Pfam GRAS domain family 153 524 IPR005202 -
Prci4g2727 525 ProSiteProfiles GRAS family profile. 144 524 IPR005202 -
Prci4g2727 525 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Prci4g2727 525 MobiDBLite consensus disorder prediction 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2727 Prci-Chr4 39413191 39415026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2727 150 525 GRAS Transcription Factor Family AT1G66350 37.076 2.78e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci4g2727 GRAS 5e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2727 - - pop:7463101 689.493