Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2720 ATGGGGTTTCATAACTTGGTTCTGCTACTCTGTTTTGCTTCTTGCTGTGTTTGTTCTTCTCAATTACAATCATCTCAAACCCAAGTGCTTCTTCAGCTAAAGAAGCACCTGGAGTACCCAAAACATCTAGATATATGGAAGGATCGTTGGGCATCTTTTTGCTCTTCTCCTTCTTCACAAGTAAATGTCACATGCCAAGGAAATTTCGTGACCGAGCTAAGCATAGTAGGTGATGCTAACCCTTCAAAGGTTAGAGATTTTAATGGGTCTCCTATCCCGAATCTGACATTGTCAGAGAACTTCTCTATGGATTCTTTTGTGGCTACTCTTGCCAGGTTAACTGGCTTGAAAGTTCTTCGTCTCGTTTCTTTGGGCTTGTGGGGTCCGCTTCCTAATAAAATCCAGAGACTAAATGAGCTTGAACATTTGGACCTGAGTTCAAACTTTCTTTACGGCTCAATTCCACCAAAGATTTCTACCATTGTGAACCTTCAAGTTCTTGCACTTGATGACAACTTCTTTAACAGTACTATTCCCGTTTGGTTCAATTCTTTGACTAATTTGACAGTTCTTGGCTTGAGTAATAACAGATTGAAGGGTCAGTTAGGAGATTTTAGTGTTTTGAATGCCTTAGAAGTGCTAGATTTGAGAGAGAACAGATTGGACTCTACACTACCAAATGTGCCAAAAGGGTTACTAAGGCTTTTTCTGAGCAAAAACTTGTTCTCAGGTGAAATTCCCAAGCAGTATGGTCAGCTAAATAGGCTTCAACAGCTAGACATTTCATTCAATGCACTCACAGGAACGCCTCCTGCTGGGATTTTCTCGTTGCCCAATATCACTTCCTTGAATTTGGCATCAAACATGTTAAGTGGGTCACTTCAGAACAATCTAAAATGTAGCAGCAAACTCAGATTTGTTGATATTTCACACAACAGGTTAATGGGTTTCTTGCCTTCTTGTCTGGGAACAGAGTCAGAAAACAGGGTTGTGAAGCTTGAAGGAAATTGCTTATCCTCTAAGTTTCAGCATCAACACGCAGTATCATACTGCACAGAGGTTCAAGTGAGGAAGAACACACTCAGAGTTGGAATTTTAGTTGGTGTAATTGTTGGAGCTTTTCTAATAATTGTGATTTTGGCGTTGGGAATTGTTGTGTGTGGAAGACATAGCTCTAGGGGGATCTCAGAGCAGCATCTATTTAATAAAACAGTTCAAGATAGCTCTATAGCTGCAGTTGGGCTCTCCACTGAGATTCTGGCTAATGCAAGATTTATTTCTCAAGCTTCGAAGTTAGGCAAAGAAGAGATGCCCATGTGTAGGCCCTACTCTTTTGAAGAGCTTAAGCAAGCTACAAATAACTTTCATGACGCTACCTTCATGGGTGGAAATTTATACGGGAAGCTTTACAGGGGCAAGCTACAAAATGGGAAGCAAATTACAATAAGAAGCCTGCCACTGTCGAAGAAATATTCATTCAGGAATTTCAAGCTCAGGTTGGATTTGCTTGCAAGGCTTCGTCATCCTCATCTGGTTTCTCTCTTGGGTCACTGCACTGATGGTGTTGTAGCAGAAAATAACGGCAGAAACATCTTTCTCATATACGAATACGTGCACAATGGAAGTTTTCAGAGTTACCTATCTGGAACTAGTTCTGGCAAGGTTTTCAGTTGGTCTGAGAGGTTGGCGGTTTTGGTTAGTATTGCCAAGGCAGTTCACTTTCTGCACACCGGAATGATACCTGGTTTCTTCAAGAACCGGCTCAAAACAAACAATATACTGGTTAGTGAGAATTGGACGGCAAAATTAAGTGACTATGGATTGTCCATTATCTCAGAAGAAGTTGATATATGTGAGGAGAAAGGAGAGAACTCTGGATCATGGGAAATGAAGAGATTAGAAGATGATATTTACAGCTTTGGATTTATACTGCTTGAAGCACTTCTTGGACTTTCAGTATCTGCTAAAAAAGAAGCAATTTTCCCGAATGTGATGTACTGTAATTGCAGGCGTGTTTCAACAGCGAAGATGGGTGGAAGCGGATAG 2046 0.4086 MGFHNLVLLLCFASCCVCSSQLQSSQTQVLLQLKKHLEYPKHLDIWKDRWASFCSSPSSQVNVTCQGNFVTELSIVGDANPSKVRDFNGSPIPNLTLSENFSMDSFVATLARLTGLKVLRLVSLGLWGPLPNKIQRLNELEHLDLSSNFLYGSIPPKISTIVNLQVLALDDNFFNSTIPVWFNSLTNLTVLGLSNNRLKGQLGDFSVLNALEVLDLRENRLDSTLPNVPKGLLRLFLSKNLFSGEIPKQYGQLNRLQQLDISFNALTGTPPAGIFSLPNITSLNLASNMLSGSLQNNLKCSSKLRFVDISHNRLMGFLPSCLGTESENRVVKLEGNCLSSKFQHQHAVSYCTEVQVRKNTLRVGILVGVIVGAFLIIVILALGIVVCGRHSSRGISEQHLFNKTVQDSSIAAVGLSTEILANARFISQASKLGKEEMPMCRPYSFEELKQATNNFHDATFMGGNLYGKLYRGKLQNGKQITIRSLPLSKKYSFRNFKLRLDLLARLRHPHLVSLLGHCTDGVVAENNGRNIFLIYEYVHNGSFQSYLSGTSSGKVFSWSERLAVLVSIAKAVHFLHTGMIPGFFKNRLKTNNILVSENWTAKLSDYGLSIISEEVDICEEKGENSGSWEMKRLEDDIYSFGFILLEALLGLSVSAKKEAIFPNVMYCNCRRVSTAKMGGSG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2720 681 Gene3D Ribonuclease Inhibitor 233 366 IPR032675 -
Prci4g2720 681 Gene3D Ribonuclease Inhibitor 23 232 IPR032675 -
Prci4g2720 681 Pfam Leucine Rich Repeat 140 155 IPR001611 GO:0005515
Prci4g2720 681 SMART LRR_typ_2 208 231 IPR003591 -
Prci4g2720 681 SMART LRR_typ_2 137 161 IPR003591 -
Prci4g2720 681 SMART LRR_typ_2 253 277 IPR003591 -
Prci4g2720 681 SMART LRR_typ_2 185 207 IPR003591 -
Prci4g2720 681 Pfam Protein tyrosine and serine/threonine kinase 462 628 IPR001245 GO:0004672|GO:0006468
Prci4g2720 681 ProSiteProfiles Protein kinase domain profile. 455 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2720 681 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 232 356 - -
Prci4g2720 681 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 107 202 - -
Prci4g2720 681 SUPERFAMILY Protein kinase-like (PK-like) 437 653 IPR011009 -
Prci4g2720 681 PANTHER UNNAMED PRODUCT 89 650 - -
Prci4g2720 681 Pfam Leucine rich repeat 255 314 IPR001611 GO:0005515
Prci4g2720 681 Pfam Leucine rich repeat 163 221 IPR001611 GO:0005515
Prci4g2720 681 Gene3D Transferase(Phosphotransferase) domain 1 538 669 - -
Prci4g2720 681 SUPERFAMILY L domain-like 88 359 - -
Prci4g2720 681 Gene3D Phosphorylase Kinase; domain 1 417 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2720 Prci-Chr4 39334023 39338118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2720 19 665 Miscellaneous Gene Families AT5G14210 50.073 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Prci4g2720 PK_Tyr_Ser-Thr 5.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2720 - - pcin:129308796 1260.36