Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2710 ATGAAGATCATATTGGTCATACCAGCATTGGATATCCATACTCCAATTTTTGCATCTTCCTTTACAATGGAGCTTATTAGAAAACGTTTGAAGGAGCATGGTATTTTTGTTCCATCACGACTCAAAGTATTCCGAACAAAGAAGAAGTTTGTGGCTGGGCCATTTGAAATAGAGCCAATCAGGGTGACCCATTCTATCCCTGATTGTTGTGGGTTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCATACTGGGGACTGGAAGATTGATGAATCACCAATGGATGGGAAAGTTTTTGACCGTGAAACTTTGGAGGAACTCTCTAAAGAAGGAGTAACACTAATGATGAGTGATTCAACAAACATACTTTCACCTGGAAGAACAGCTAGTGAGTCTAACGTGGCAGATGCACTGTTAAGGCATATTTCTGCTGCTAAAGGAAGGGTTATTACAACCCAGTTTGCATCAAATATCCATCGTATTGGAAGTGTGAAAGCTGCAGCTGATTTAACTGGTAGAAAAATGGTATTTGTTGGCATGTCTTTACGGACATATCTAGATGCAGCTTGGAAGGATGGAAAAGCACCGTTCGATCCATCCACCCTGGTGAAAGTGGAGGATATTGATGCTTATGCTCCTAAGGATTTGCTGATTGTAACAACTGGATCTCAGGCAGAACCTCGTGCTGCCTTGAATCTTGCATCATATGGTGGTGGTCATTCTTTCAAACTGACCAAGGAAGATATAATTTTGTATTCAGCTAAGGTTATCCCTGGCAATGAGTCTCGTGTGATGAAAATGATGAACCGCATAGCAGAGATTGGATCATCAATAGTAATGGGGAAGAATGAGGGGCTGCACACGTCTGGTCATGCGTATCGTGGAGAATTGGAGGAAGTGCTTAGAATAGTGAAACCACAACACTTTCTTCCCATACATGGAGAACTCTTGTTCCTGAAGGAGCACGAATTACTTGGAAAGTCAACTGGCATTCGACACACTGCTGTTATTAAGAACGGAGAGATGCTTGGCGTTTCACACTTAAGAAATAGAAAAGTCCTTTCCAATGGTTTTGTTTCCCTTGGAAAAGAGAACTTACAGTTGAAGTACAGTGATGGGGACAAAGCATTTGGTACATCTAGTGAACTCTTTATTGATGAAAGATTGAGAGTTGCTTTAGATGGAATTATCGTGGTCAGCATGGAAATATTTCGCCCTCAAAATAGTGAAAGTCATGCTGAAAGCACCTTGAAAGGGAAGATAAGAATTACCACTAGATGCCTATGGCTTGACAAAGGAAAGCTGCTTGATGCGCTTCATAAAGCTGCTCATGCTGCACTTTCAAGCTGCCCGGTAAGCTGTCCATTGGCTCACATGGAAAGAATTGTATCTGAGGTATTGAGGAAGTTGGTGAGGAAGTATAGTGGCAAAAGACCAGAAGTTATAGCTATTGCTACAGAAAACCCTGCAGCTGTTCTTGCTGATGAGGTAAAAGTACGGTTGTCAGGAAAATCTCATTCGGGTCTTGGATTACCATCATTGAGAAAAGCTGTGGATGGACGTAAAGAGGAAAAGAAGTCCAGTAAAATGCCAATAAAAGGAGATGATGGCACTGATGTTGAAGGACTCCTACCTGAGGAAGATTCCCCTACCTCTAGTGGAGCTGAGGGTGATTTCCCTGATTCAGAGGATTCTGACGGATTTTGGAAATCATTCATCACACCTTCAACCGCTGAAAAGTCGATCAAAGCTAACAACGGTTATATTCCACGGAAGCAGCAAGATTCCCAGCTGATGAAAGATGATTCTGAAGACTCTGGAGAAACCAAGTCTGAACCCATGCCTTCAAAAACAGCGAAGAGAAATAAATGGAAACCCGAGGAAGTGAAGAAGCTGATTGTTATGCGTGGGGAGCTTCACGAGAGATTCCAAGTTGTGAAGGGAAGAATGGTTCTCTGGGAAGAGATATCTCAAAAGTTGTTGGCTGATGGTATCCACAGAAGTCCAGGGCAATGTAAATCTCTGTGGACTTCTTTGATACAAAAATATGAGGAGATCAAGAATGGGAAGGCAAGCAAGAAAAGCTGGCCATATACGGAGGACATGGACAGGATATTGTCGGATAACGAGGCGCTAGCAGCAAAATGA 2148 0.4241 MKIILVIPALDIHTPIFASSFTMELIRKRLKEHGIFVPSRLKVFRTKKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPMDGKVFDRETLEELSKEGVTLMMSDSTNILSPGRTASESNVADALLRHISAAKGRVITTQFASNIHRIGSVKAAADLTGRKMVFVGMSLRTYLDAAWKDGKAPFDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGGHSFKLTKEDIILYSAKVIPGNESRVMKMMNRIAEIGSSIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRKVLSNGFVSLGKENLQLKYSDGDKAFGTSSELFIDERLRVALDGIIVVSMEIFRPQNSESHAESTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVSCPLAHMERIVSEVLRKLVRKYSGKRPEVIAIATENPAAVLADEVKVRLSGKSHSGLGLPSLRKAVDGRKEEKKSSKMPIKGDDGTDVEGLLPEEDSPTSSGAEGDFPDSEDSDGFWKSFITPSTAEKSIKANNGYIPRKQQDSQLMKDDSEDSGETKSEPMPSKTAKRNKWKPEEVKKLIVMRGELHERFQVVKGRMVLWEEISQKLLADGIHRSPGQCKSLWTSLIQKYEEIKNGKASKKSWPYTEDMDRILSDNEALAAK 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2710 715 MobiDBLite consensus disorder prediction 569 593 - -
Prci4g2710 715 Pfam Myb/SANT-like DNA-binding domain 621 705 IPR044822 -
Prci4g2710 715 MobiDBLite consensus disorder prediction 595 623 - -
Prci4g2710 715 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 286 323 IPR011108 -
Prci4g2710 715 CDD GT1 622 687 - -
Prci4g2710 715 Gene3D - 243 363 IPR036866 -
Prci4g2710 715 MobiDBLite consensus disorder prediction 516 540 - -
Prci4g2710 715 SUPERFAMILY Metallo-hydrolase/oxidoreductase 13 343 IPR036866 -
Prci4g2710 715 Gene3D - 624 685 - -
Prci4g2710 715 Gene3D - 4 184 IPR036866 -
Prci4g2710 715 MobiDBLite consensus disorder prediction 510 623 - -
Prci4g2710 715 PANTHER RIBONUCLEASE J 4 715 - -
Prci4g2710 715 ProSiteProfiles Myb-like domain profile. 616 680 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2710 Prci-Chr4 39286172 39294054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2710 623 707 Trihelix Transcription Factor Family AT2G38250 35.632 3.93e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci4g2710 Myb_DNA-bind_4 4.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2710 - - gmx:100783850 1130.16