Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2701 ATGGTTTCAACGAGACGTAGTGGATCTCTCTCTGGCAACAATTCCAAAAGATCTTCTTCTTCGGATGATAACCCTCCCTCACCGAAGCGTCAAAAGGCTGAAAATGGCGGTCCGTCGGAGAAACCGAAGCCGGCAGCGGAGAATTCTAAAGAAGTAAGTACTCCTGAGCCGGCGGTTGATCCTGGAGAATGCGATGCTCAGATCGCTGGAGATGGCACTGGTGATGGCCTTACTTCTGGCAAGGGTGATGCTGCGGCGGGTGTCGCTGTGGCGCTGCCGATCGGTGATGGGTCTTCGCCGACTTTGGTTGTTGATAAGCCCAGGGGTTCCTTGTCTTCGTGGAATATATATCAGAAGCAAAGTCCAAGTTCTGAGACCTCCGCACCTTGGTGCAAGCTTCTGTCGCAGTCTGCCCTGAACCCAAATGTTTCCATTTGCACACCCAACTTCACAATTGGTTCCAGTAGAAATTGCAACTTTCCATTGAAGGATCAGACTATAAGTGGAAATCTATGCAAGATTAAGCATACCCAGCGTGAGGGATGTGCTGTAGCCTTGCTGGAGAGTACTGGTAGCAAAGGATCTGTGCTAGTTAATGGGACAATTGTCAAGAAGAACGGCAACTGTGTGCTTAACTCGGGTGATGAAGTGGTCTTTGGTTTGCTGGGAAATCATTCTTATATTTTTCAGCAGCTAAATACTGATGTTGCAGTTAAGGGTGCAGAAATTCAGGGTGGTGTAGGGAAATTTCTGCAGCTTGAAAGGAGAACTGGAGACCCCTCAGCTGTGGCTGGGGCTTCCATTTTGGCTTCTCTTTCTAGCTTTAGACAAGATCTCTCAAGATGGAAATCTCCGTCTCAGAATAATAATAAAGCCCAGCAGGGTACTGATGTCTCTGCTCATTCTGCTCATCATGATAATACAGAAATTGAGCTTGATGGTCCGGAAGGCAACTCAGCTCCAAACGTAGAGAGTGACAAAGCAGCTGATGTTGGAGCAAGTGACAAGAATCATCCAATGGAATGCGATCCAGATGCAAGCACGGAGGCAGGCAATGTATTGGAAGAAAGAAATGGGACGAGGGATATGCTGGCAGCATCAACCTCGGGTATGTCTGTGCGCTGTGCGGTGTTCAAAGAAGATGTTCATGCTGCAATATTGGATGGAAAAGACATAGAAGTGTCATTTGACAACTTCCCATATTATTTAAGTGAGAACACAAAAAATGTCTTGGTTGCAGCTTGCTTTATTCACCTGAAGCATAAGGAACATGCAAAATACACAACAGATCTTACAACTATTAACCCTCGTATTTTACTTTCTGGACCTGCAGGGTCAGAAATTTATCAGGAGATGCTGGCAAAAGCACTTGCTAATTACTTTGGGGCTAAGTTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCATCCAAAGAAGCAGAGCTACTCAAAGATGGGCTTATTGTTGAAAAAACCTGCAACTGCACCAAGCAAAGTTCTACAGCCACCGACTTGGCTAGGAATGTGGACCCATCAACTAGTGAAACAGATACGCCTAGCCCTCCAAATGCACCTACTTCTTATGGCCTTGAATCTCAACCTAAAACTGAGACCGATACTGCGCCTTCCACTTCTGGGACAACTAAAAATTGTTTGTTTAAAATAGGTGACAGGGTGAAATATAGCTGCTCATCTTCTGGTGGTTTGTATCAGCCATCCTCAAGGGGCCCACCTAATGGAAGTCGGGGGAAGGTTGTTTTATGTTTTGATGATAATCCTTCGTCAAAAATTGGTGTAAGATTTGATAAGTCCATACCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTTAGTGATCTTCGATTGGAAAATAGTTTTGTGGAGGAGTTGGACAAATTACTTATCAATACATTATTTGAGGTTGTTTGTAGTGAGAGCAGAACTGCGCCTTTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATCGTAGGAAATGGAGATCCATATTCATTTAAAAGTAGGCTTGAAAAGCTTCCAGACAATGTGGTTGTTATAGGCTCGCATACTCACACTGACAGTCGGAAGGAGAAGTCACATCCAGGGGGTTTGCTTTTTACGAAGTTTGGAAGCAATCAAACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGAGAGGGGGAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTTCCTAATAAAGTTACAATTCATATGCCACAGGATGAGGCACTTCTAGCATCCTGGAAGCAGCAGCTGGATCGAGATGCTGAGACTCTAAAAATCAAGGCAAACTTGCATCACCTGCGCACGGTTTTGAGTCGTTGTGGAATGGAATGTGAAGGACTTGAGTCTTTGTGCATTAAAGACCAGGCGCTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGCCACCACCTCATGCAGAACCCTGAAGCTGATTCTAATTCCAAACTTGTATTGTCTTGCGAAAGCATCCAGTATGGCATTGGGATATTGCAGGCCATTCAAAATGAGTCCAAGAGCTTGAAGAAGTCTTTGAAGGATGTTGTAACAGAAAATGAGTTTGAGAAGAGGCTGTTGGCTGATGTAATTCCTCCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACACTGAAGGAGTTGGTGATGCTTCCTTTGCAGAGGCCGGAGCTTTTTTGCAAGGGGCAATTAACCAAGCCTTGCAAGGGTATCTTATTGTTTGGGCCCCCAGGAACTGGAAAGACAATGCTTGCAAAGGCTGTTGCCACTGAAGCAGGTGCTAACTTCATCAACATTTCCATGTCAAGCATTACGTCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTCTTCTCTCTGGCCAGTAAAATTGCTCCTAGTGTTATATTTGTTGATGAAGTTGACAGCATGTTGGGCAGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGCAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACGAAGGATACCGAGCGAATTCTAGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATCCGGAGGCTGCCACGAAGATTGATGGTAAATTTGCCAGATGCTCCAAATAGGGCAAAAATATTGAAAGTTATACTAGCAAAAGAGGATTTGTCTCCTGATGTCGACTTGGAAGCAGTTGCCAATATGACTGACGGATATTCTGGAAGTGATCTCAAGAATCTTTGCGTGACTGCTGCACATCGCCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAGCGCGCTGCTGCTCTGGCAGAAGGCAGATCTCCTCCGGCATTAAGTGGCAGTGCTGATATCCGATCTTTAAACATGGAGGACTTTAAAGATGCTCATGAACGGGTATGTGCAAGTGTTTCCTCTGAATCCGTAAATATGACTGAGCTCTTACAATGGAATGAACTATACGGCGAAGGTGGTTCGAGAAGAAAGAAAGCACTCAGCTATTTCATGTGA 3615 0.4443 MVSTRRSGSLSGNNSKRSSSSDDNPPSPKRQKAENGGPSEKPKPAAENSKEVSTPEPAVDPGECDAQIAGDGTGDGLTSGKGDAAAGVAVALPIGDGSSPTLVVDKPRGSLSSWNIYQKQSPSSETSAPWCKLLSQSALNPNVSICTPNFTIGSSRNCNFPLKDQTISGNLCKIKHTQREGCAVALLESTGSKGSVLVNGTIVKKNGNCVLNSGDEVVFGLLGNHSYIFQQLNTDVAVKGAEIQGGVGKFLQLERRTGDPSAVAGASILASLSSFRQDLSRWKSPSQNNNKAQQGTDVSAHSAHHDNTEIELDGPEGNSAPNVESDKAADVGASDKNHPMECDPDASTEAGNVLEERNGTRDMLAASTSGMSVRCAVFKEDVHAAILDGKDIEVSFDNFPYYLSENTKNVLVAACFIHLKHKEHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHLLLGGLSSKEAELLKDGLIVEKTCNCTKQSSTATDLARNVDPSTSETDTPSPPNAPTSYGLESQPKTETDTAPSTSGTTKNCLFKIGDRVKYSCSSSGGLYQPSSRGPPNGSRGKVVLCFDDNPSSKIGVRFDKSIPDGVDLGGACEGGQGFFCNVSDLRLENSFVEELDKLLINTLFEVVCSESRTAPFILFMKDAEKSIVGNGDPYSFKSRLEKLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHERGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDAETLKIKANLHHLRTVLSRCGMECEGLESLCIKDQALTNENAEKIIGWALSHHLMQNPEADSNSKLVLSCESIQYGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPDVDLEAVANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERAAALAEGRSPPALSGSADIRSLNMEDFKDAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2701 1204 CDD FHA 132 230 - -
Prci4g2701 1204 MobiDBLite consensus disorder prediction 506 548 - -
Prci4g2701 1204 MobiDBLite consensus disorder prediction 280 352 - -
Prci4g2701 1204 ProSitePatterns AAA-protein family signature. 1043 1062 IPR003960 GO:0005524|GO:0016887
Prci4g2701 1204 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 898 1074 - -
Prci4g2701 1204 Coils Coil 860 880 - -
Prci4g2701 1204 Gene3D - 129 238 - -
Prci4g2701 1204 Pfam ATPase family associated with various cellular activities (AAA) 940 1069 IPR003959 GO:0005524|GO:0016887
Prci4g2701 1204 Gene3D - 898 1179 IPR027417 -
Prci4g2701 1204 Pfam FHA domain 151 220 IPR000253 GO:0005515
Prci4g2701 1204 MobiDBLite consensus disorder prediction 329 343 - -
Prci4g2701 1204 MobiDBLite consensus disorder prediction 280 301 - -
Prci4g2701 1204 MobiDBLite consensus disorder prediction 1 26 - -
Prci4g2701 1204 Pfam AAA+ lid domain 1093 1128 IPR041569 -
Prci4g2701 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 899 1180 IPR027417 -
Prci4g2701 1204 SUPERFAMILY SMAD/FHA domain 111 228 IPR008984 GO:0005515
Prci4g2701 1204 Gene3D - 1072 1166 - -
Prci4g2701 1204 MobiDBLite consensus disorder prediction 1 80 - -
Prci4g2701 1204 SMART AAA_5 936 1073 IPR003593 GO:0016887
Prci4g2701 1204 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 378 1203 - -
Prci4g2701 1204 CDD RecA-like_ATAD1 903 1069 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2701 Prci-Chr4 39217513 39228774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2701 899 1131 Calmodulin-binding Proteins AT3G56690 40.928 8.56e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2701 - - gmx:100780098 1890.55