Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2700 ATGGTTTCAACGAGACGTAGTGGATCTCTCTCTGGCAACAATTCCAAAAGATCTTCTTCTTCGGATGATAACCCTCCCTCACCGAAGCGTCAAAAGGCTGAAAATGGCGGTCCGTCGGAGAAACCGAAGCCGGCAGCGGAGAATTCTAAAGAAGTAAGTACTCCTGAGCCGGCGGTTGATCCTGGAGAATGCGATGCTCAGATCGCTGGAGATGGCACTGGTGATGGCCTTACTTCTGGCAAGGGTGATGCTGCGGCGGGTGTCGCTGTGGCGCTGCCGATCGGTGATGGGTCTTCGCCGACTTTGGTTGTTGATAAGCCCAGGGGTTCCTTGTCTTCGTGGAATATATATCAGAAGCAAAGTCCAAGTTCTGAGACCTCCGCACCTTGGTGCAAGCTTCTGTCGCAGTCTGCCCTGAACCCAAATGTTTCCATTTGCACACCCAACTTCACAATTGGTTCCAGTAGAAATTGCAACTTTCCATTGAAGGATCAGACTATAAGTGGAAATCTATGCAAGATTAAGCATACCCAGCGTGAGGGATGTGCTGTAGCCTTGCTGGAGAGTACTGGTAGCAAAGGATCTGTGCTAGTTAATGGGACAATTGTCAAGAAGAACGGCAACTGTGTGCTTAACTCGGGTGATGAAGTGGTCTTTGGTTTGCTGGGAAATCATTCTTATATTTTTCAGCAGCTAAATACTGATGTTGCAGTTAAGGGTGCAGAAATTCAGGGTGGTGTAGGGAAATTTCTGCAGCTTGAAAGGAGAACTGGAGACCCCTCAGCTGTGGCTGGGGCTTCCATTTTGGCTTCTCTTTCTAGCTTTAGACAAGATCTCTCAAGATGGAAATCTCCGTCTCAGAATAATAATAAAGCCCAGCAGGGTACTGATGTCTCTGCTCATTCTGCTCATCATGATAATACAGAAATTGAGCTTGATGGTCCGGAAGGCAACTCAGCTCCAAACGTAGAGAGTGACAAAGCAGCTGATGTTGGAGCAAGTGACAAGAATCATCCAATGGAATGCGATCCAGATGCAAGCACGGAGGCAGGCAATGTAAAACTTTCTGGGATGACTGATTTCCTAAGGCCTTTCCTCAGGATCTTAGCTCGATCTAGTTGTAAACTGAATTTGAGCAAAAGTATCTTTAAACAGGTATTGGAAGAAAGAAATGGGACGAGGGATATGCTGGCAGCATCAACCTCGGGTATGTCTGTGCGCTGTGCGGTGTTCAAAGAAGATGTTCATGCTGCAATATTGGATGGAAAAGACATAGAAGTGTCATTTGACAACTTCCCATATTATTTAAGTGAGAACACAAAAAATGTCTTGGTTGCAGCTTGCTTTATTCACCTGAAGCATAAGGAACATGCAAAATACACAACAGATCTTACAACTATTAACCCTCGTATTTTACTTTCTGGACCTGCAGGGTCAGAAATTTATCAGGAGATGCTGGCAAAAGCACTTGCTAATTACTTTGGGGCTAAGTTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCATCCAAAGAAGCAGAGCTACTCAAAGATGGGCTTATTGTTGAAAAAACCTGCAACTGCACCAAGCAAAGTTCTACAGCCACCGACTTGGCTAGGAATGTGGACCCATCAACTAGTGAAACAGATACGCCTAGCCCTCCAAATGCACCTACTTCTTATGGCCTTGAATCTCAACCTAAAACTGAGACCGATACTGCGCCTTCCACTTCTGGGACAACTAAAAATTGTTTGTTTAAAATAGGTGACAGGGTGAAATATAGCTGCTCATCTTCTGGTGGTTTGTATCAGCCATCCTCAAGGGGCCCACCTAATGGAAGTCGGGGGAAGGTTGTTTTATGTTTTGATGATAATCCTTCGTCAAAAATTGGTGTAAGATTTGATAAGTCCATACCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTTAGTGATCTTCGATTGGAAAATAGTTTTGTGGAGGAGTTGGACAAATTACTTATCAATACATTATTTGAGGTTGTTTGTAGTGAGAGCAGAACTGCGCCTTTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATCGTAGGAAATGGAGATCCATATTCATTTAAAAGTAGGCTTGAAAAGCTTCCAGACAATGTGGTTGTTATAGGCTCGCATACTCACACTGACAGTCGGAAGGAGAAGTCACATCCAGGGGGTTTGCTTTTTACGAAGTTTGGAAGCAATCAAACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGAGAGGGGGAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTTCCTAATAAAGTTACAATTCATATGCCACAGGATGAGGCACTTCTAGCATCCTGGAAGCAGCAGCTGGATCGAGATGCTGAGACTCTAAAAATCAAGGCAAACTTGCATCACCTGCGCACGGTTTTGAGTCGTTGTGGAATGGAATGTGAAGGACTTGAGTCTTTGTGCATTAAAGACCAGGCGCTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGCCACCACCTCATGCAGAACCCTGAAGCTGATTCTAATTCCAAACTTGTATTGTCTTGCGAAAGCATCCAGTATGGCATTGGGATATTGCAGGCCATTCAAAATGAGTCCAAGAGCTTGAAGAAGTCTTTGAAGGATGTTGTAACAGAAAATGAGTTTGAGAAGAGGCTGTTGGCTGATGTAATTCCTCCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACACTGAAGGAGTTGGTGATGCTTCCTTTGCAGAGGCCGGAGCTTTTTTGCAAGGGGCAATTAACCAAGCCTTGCAAGGGTATCTTATTGTTTGGGCCCCCAGGAACTGGAAAGACAATGCTTGCAAAGGCTGTTGCCACTGAAGCAGGTGCTAACTTCATCAACATTTCCATGTCAAGCATTACGTCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTCTTCTCTCTGGCCAGTAAAATTGCTCCTAGTGTTATATTTGTTGATGAAGTTGACAGCATGTTGGGCAGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGCAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACGAAGGATACCGAGCGAATTCTAGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATCCGGAGGCTGCCACGAAGATTGATGGTAAATTTGCCAGATGCTCCAAATAGGGCAAAAATATTGAAAGTTATACTAGCAAAAGAGGATTTGTCTCCTGATGTCGACTTGGAAGCAGTTGCCAATATGACTGACGGATATTCTGGAAGTGATCTCAAGAATCTTTGCGTGACTGCTGCACATCGCCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAGCGCGCTGCTGCTCTGGCAGAAGGCAGATCTCCTCCGGCATTAAGTGGCAGTGCTGATATCCGATCTTTAAACATGGAGGACTTTAAAGATGCTCATGAACGGGTATGTGCAAGTGTTTCCTCTGAATCCGTAAATATGACTGAGCTCTTACAATGGAATGAACTATACGGCGAAGGTGGTTCGAGAAGAAAGAAAGCACTCAGCTATTTCATGTGA 3714 0.4424 MVSTRRSGSLSGNNSKRSSSSDDNPPSPKRQKAENGGPSEKPKPAAENSKEVSTPEPAVDPGECDAQIAGDGTGDGLTSGKGDAAAGVAVALPIGDGSSPTLVVDKPRGSLSSWNIYQKQSPSSETSAPWCKLLSQSALNPNVSICTPNFTIGSSRNCNFPLKDQTISGNLCKIKHTQREGCAVALLESTGSKGSVLVNGTIVKKNGNCVLNSGDEVVFGLLGNHSYIFQQLNTDVAVKGAEIQGGVGKFLQLERRTGDPSAVAGASILASLSSFRQDLSRWKSPSQNNNKAQQGTDVSAHSAHHDNTEIELDGPEGNSAPNVESDKAADVGASDKNHPMECDPDASTEAGNVKLSGMTDFLRPFLRILARSSCKLNLSKSIFKQVLEERNGTRDMLAASTSGMSVRCAVFKEDVHAAILDGKDIEVSFDNFPYYLSENTKNVLVAACFIHLKHKEHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHLLLGGLSSKEAELLKDGLIVEKTCNCTKQSSTATDLARNVDPSTSETDTPSPPNAPTSYGLESQPKTETDTAPSTSGTTKNCLFKIGDRVKYSCSSSGGLYQPSSRGPPNGSRGKVVLCFDDNPSSKIGVRFDKSIPDGVDLGGACEGGQGFFCNVSDLRLENSFVEELDKLLINTLFEVVCSESRTAPFILFMKDAEKSIVGNGDPYSFKSRLEKLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHERGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDAETLKIKANLHHLRTVLSRCGMECEGLESLCIKDQALTNENAEKIIGWALSHHLMQNPEADSNSKLVLSCESIQYGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPDVDLEAVANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERAAALAEGRSPPALSGSADIRSLNMEDFKDAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2700 1237 CDD FHA 132 230 - -
Prci4g2700 1237 Pfam FHA domain 151 220 IPR000253 GO:0005515
Prci4g2700 1237 Gene3D - 931 1212 IPR027417 -
Prci4g2700 1237 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 931 1107 - -
Prci4g2700 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 932 1213 IPR027417 -
Prci4g2700 1237 SUPERFAMILY SMAD/FHA domain 111 228 IPR008984 GO:0005515
Prci4g2700 1237 MobiDBLite consensus disorder prediction 329 343 - -
Prci4g2700 1237 MobiDBLite consensus disorder prediction 1 26 - -
Prci4g2700 1237 MobiDBLite consensus disorder prediction 280 301 - -
Prci4g2700 1237 CDD RecA-like_ATAD1 936 1102 - -
Prci4g2700 1237 Pfam AAA+ lid domain 1126 1161 IPR041569 -
Prci4g2700 1237 Gene3D - 129 238 - -
Prci4g2700 1237 ProSitePatterns AAA-protein family signature. 1076 1095 IPR003960 GO:0005524|GO:0016887
Prci4g2700 1237 SMART AAA_5 969 1106 IPR003593 GO:0016887
Prci4g2700 1237 MobiDBLite consensus disorder prediction 1 80 - -
Prci4g2700 1237 Gene3D - 1105 1199 - -
Prci4g2700 1237 MobiDBLite consensus disorder prediction 280 351 - -
Prci4g2700 1237 Coils Coil 893 913 - -
Prci4g2700 1237 Pfam ATPase family associated with various cellular activities (AAA) 973 1102 IPR003959 GO:0005524|GO:0016887
Prci4g2700 1237 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 411 1236 - -
Prci4g2700 1237 MobiDBLite consensus disorder prediction 539 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2700 Prci-Chr4 39217513 39228774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2700 932 1164 Calmodulin-binding Proteins AT3G56690 40.928 8.07e-41 162