Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2694 ATGGCGGTCACATTCGTTGATGTCAATTCTGCTTCTGGGTTGAAAAAGCTTGACGAATACCTTCTCACCCGCAGTTATATAAGTGGGTATCAAGCTTCAAAGGACGATATTACGGTATATGCAGCCTTGGCAAAGGCCCCATCAGCTGAATATGTGAACGCTTCCCGTTGGTACGAGCACATTGATGCTCTATTGAGAATCTCTGGTGTATCTGGTGACGGATCGGGAGTCAAAGTGGAGGGTTCTCTCCCTATGGCAGACGAGACCATTGCCACTCCTCCACCGGCTGACACAAAGGCTACATCAGCTGAGGAGGATGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAAGAGGAGAAGAAGGCTGCTGAAGAACGGGCGGCTGCTGTGAAGGCATCTTCAAAGAAGAAAGAATCGGGGAAGTCATCTGTTCTGTTGGATGTGAAGCCTTGGGATGATGAGACAGACATGAAAAAGCTTGAAGAAGCAGTGAGAGGAGTTCAGATGGAAGGATTGCTTTGGGGTGCTTCCAAACTTGTCCCTGTTGGGTACGGTATCAAGAAAATGCAAATTATGATGACTATAGTGGATGACCTGGTCTCGGTTGACAGCCTCATTGAGGAACATCTCATGAACGAGCCAATTAACGATTATGTCCAGAGCTGTGACATTGTGGCCTTCAATAAAATATAA 696 0.4655 MAVTFVDVNSASGLKKLDEYLLTRSYISGYQASKDDITVYAALAKAPSAEYVNASRWYEHIDALLRISGVSGDGSGVKVEGSLPMADETIATPPPADTKATSAEEDDDDVDLFGEETEEEKKAAEERAAAVKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRGVQMEGLLWGASKLVPVGYGIKKMQIMMTIVDDLVSVDSLIEEHLMNEPINDYVQSCDIVAFNKI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2694 231 FunFam Elongation factor 1-beta 1 like 136 231 - -
Prci4g2694 231 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Prci4g2694 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Prci4g2694 231 Gene3D - 3 76 - -
Prci4g2694 231 FunFam Elongation factor 1-delta 1 3 78 - -
Prci4g2694 231 CDD EF1B 145 231 IPR014038 GO:0003746|GO:0006414
Prci4g2694 231 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Prci4g2694 231 SUPERFAMILY GST C-terminal domain-like 8 67 IPR036282 -
Prci4g2694 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Prci4g2694 231 MobiDBLite consensus disorder prediction 116 135 - -
Prci4g2694 231 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Prci4g2694 231 MobiDBLite consensus disorder prediction 84 108 - -
Prci4g2694 231 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Prci4g2694 231 Gene3D - 135 231 IPR014717 -
Prci4g2694 231 Coils Coil 114 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2694 Prci-Chr4 39200998 39203929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2694 5 231 Eukaryotic Initiation Factors Gene Family AT2G18110 78.070 2.23e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2694 K03232 - qsa:O6P43_022557 349.747