Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2681 ATGGCGTCTCTACGCCATACTCCAACCTCAATCCAATCCAATCACTCTCCACTCTCCGGAAACTTCGCCTCCCCTAGACCCCCCTTCAACCTCTCATTCTCCGCCTCTACCTTCCCGTCTTCTCTCCAACTCAATTTCGCCGCCACCACTGGCCGCCGCTCCCATGGCGGCGCTCTCGGTGCCAAGATGACTTCCAGCGCCGCCGCCAGCTACGCCCTCGCGCTCGCCGACGTCGCCAAGGCCAATAACACCCTCGACTCTACGACCGCCGATATCGAGAAAATCGAGGAAATCTTTGCCGACCCTGGTGTTTTCTCCTATTTCAACAACCCTACCATAGAGACCGAGAAGAAGAAAAAGGTCGTGGAGGAAATCGCCATTTCCTCCAGCTTGCAGCCTCATACTCGAAATTTCCTCAACATTTTGGTGGATGCAAAGAGGATCGATCTGATCAAGGATATCGCGAAGGAGTATGAGTTCGTGTATAACGATTTGACGGACACGAAGCTTGCGATCGTGAGCTCGGTGGTGAAGCTGGAATCACAGCACCTGGCGCAGATAGCGAAGCAGGTGCAGAAGCTGACCGGTGCGAAAAATGTGAGAATCAAGACCTTGATTGATCCAAGTTTGGTGGCTGGATTCACGATCAGGTATGGGAATTCGGGATCTAAGTTGATTGATATGAGTGTGAAGAAGCAACTTGAAGAAATTGCTGCTCAGCTCGATTTGGGCGATATCACACTCAGTTCATGA 753 0.5193 MASLRHTPTSIQSNHSPLSGNFASPRPPFNLSFSASTFPSSLQLNFAATTGRRSHGGALGAKMTSSAAASYALALADVAKANNTLDSTTADIEKIEEIFADPGVFSYFNNPTIETEKKKKVVEEIAISSSLQPHTRNFLNILVDAKRIDLIKDIAKEYEFVYNDLTDTKLAIVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTLIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDITLSS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2681 250 Gene3D - 67 159 IPR026015 -
Prci4g2681 250 MobiDBLite consensus disorder prediction 1 21 - -
Prci4g2681 250 Pfam ATP synthase delta (OSCP) subunit 68 241 IPR000711 GO:0015986|GO:0046933
Prci4g2681 250 PANTHER ATP SYNTHASE DELTA CHAIN 51 242 IPR000711 GO:0015986|GO:0046933
Prci4g2681 250 Hamap ATP synthase subunit delta [atpD]. 63 243 IPR000711 GO:0015986|GO:0046933
Prci4g2681 250 NCBIfam ATP synthase F1 subunit delta 68 241 IPR000711 GO:0015986|GO:0046933
Prci4g2681 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 166 IPR026015 -
Prci4g2681 250 Coils Coil 78 98 - -
Prci4g2681 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 200 219 IPR020781 GO:0015986|GO:0016020|GO:0046933
Prci4g2681 250 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Prci4g2681 250 PRINTS ATP synthase delta subunit signature 198 213 IPR000711 GO:0015986|GO:0046933
Prci4g2681 250 PRINTS ATP synthase delta subunit signature 147 161 IPR000711 GO:0015986|GO:0046933
Prci4g2681 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Prci4g2681 250 PRINTS ATP synthase delta subunit signature 136 147 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2681 Prci-Chr4 39088780 39089783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2681 1 250 Primary Pumps ATPases AT4G09650 59.200 1.65e-98 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2681 K02113 - qsa:O6P43_030724 334.339