Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci4g2677 | ATGCTCTCATTTCGTTCTTGCTTCTCTCCCCCATTCTTTCACCCCGTCAAGTCTCTCTTTCGTCTCGAATTTTCTCTCACACCCCCTAAAACTTTCTTGTTCAAGCCCATCTTCCTTTCAGCTCATAATCGCTGTGGCAACATGTCGTCACGACCGTCTGCCTTTGATGCTCTCATGTCTGGGGCTCGTGCCGCTGCCAAGAAAAAGCCCCAATCATCATCGCCCGGGAAACGAAAAGCCCCGGATTCTAATTCAACCCAAAACCCTAAAACCCTCAAATGCACGGAAAGTACTGGTCAGTCTTTGGAACCCAGTAACGATACTAAGTCCACTGACATTAAAGATTCCGAGAAGGCACAAGAACCGACCAAAGAACACTTGAGCAACGGGGGGCTGACAGGGTCTGAGGGTGCACTTGCGGCGAAGAGAATGCGCGTCGTTGGTTCCCAGGAGAAGATTACAGAGCTGAAGAAAAAAGTTTCTCTTTTGAAGAAGAAACCTACAGATTTTGACCCTAGTTCCATGTCTTGTTGGGAGAAGGGTGAACCTGTGCCCTTTCTGTTTCTCGGTTTGGCATTTGATATGATTGCAGAAGAAACAGGACGCATTGTGATTACAGATATAGTGTGCAATATGCTGAGGACTGTTATGAACACTACACCCGAGGATCTGGTGGCTGTTGTTTATCTTTCCGCAAATAAGATTGCCACTGCACATGAAGGGTTGGAATTGGGAATAGGGGATGCTTCAATTATCAAGGCGCTTGCAGAGGCATGTGGAAGGACTGAGGTGCAGATAAAAAATCAGTATAAGGAAAAAGGTGATTTGGGCCTTGTTGCCAAGGCAAGCCGCTCGTCTCAAGCAATGATGCGGAAACCTGATCCATTAACTATTAGGAAGGTTTTCAACACCTTTCGTCTTATTGCCAAGGAATCTGGTAAAGACAGCCACGAGAAGAAAAAGAATCACATCAAGGGACTTCTTGTTGCTGCAACTGACTGTGAACCTCAATATCTAATTCGTCTGCTTCAGTCAAAGTTGCGGATTGGGTATGCTGAGCAAACTCTCTTAGCTGCACTGGGCCAAGCTGCGGTATACACTGAAGGACATTCTATACCACCTCCTAAAGTTCAGTCCCCCTTAGAGGAGGCTGCAAAGATTGTTAAACAAGTATATTCAGTTCTTCCTGTGTATGACAAAATAATTCCTGCATTGCTTAGTGGTGGTGTATGGAAACTTCCAGAGACATGTCACTTTACTCTTGGTGTTCCAGTTGGACCTATGTTGTCTAAAGCAACTAAGGGTGTATCTGAAGTTCTAAATAAATTCCAGGATGCAGAGTTTACTTGTGAATACAAATATGATGGAGAGCGTGCCCAGGTACATTACATGGACAATGGATCAGTTGAGATTTACAGTAGAAATGCTGAACGGAATACGGGAAAGTTTCCTGATGTTGTTGCTGCTATTTCAAGGGTAAAGAAATCGTCTGTATCATCATTTGTTCTTGATTGTGAACTTGTTGCATATGACCGGGAGAAAAAGAAAATTCTTCCTTTTCAGGTTCTCAGTACCCGAGCTCGCAAAAATGTATCTATGAGTGATATTAAAGTCGATGTATGCATATTTGCATTTGATATCTTGTATCTCAACGGCAAGCCACTACTTCAGGAAAACCTGAAAATTCGGAGAGAGCATCTCTATGCCTCTTTTGAGGAAGAACCTGGATTTTTTCAGTTTGCAACAGCAATAACATCAAATGATGTTGAGGAAATACAAAAGTTTCTCGATGCAGCTGTTGATGCTAGTTGTGAGGGTTTAATTATCAAAACATTGTATGAAGACGCGACGTATGAACCTTCCAAGCGGTCACTGAACTGGCTAAAACTGAAGAAAGATTATCTTGAAAATATAGGGGACTCACTGGATTTGGTACCTATTGCTGCATTTCATGGTCGTGGAAAACGTACAGGGGTCTATGGAGCTTTTCTCCTTGCTTGCTATGACAGCAATAATGAAGAATTTCAAAGCATTTGTAAAATAGGCACGGGATTCTCAGAGGCAACACTTGAAGAACGTTCTGCTAGTCTTCGTACTAAAGTGATTCCGAAACCAAAGCCTTATTATCGATATGCAGAGACAATCAATCCTGATGTATGGTTTGAAGCCTCTGAGGTGTGGGAGGTGAAAGCAGCAGACTTGACCATTAGCCCCGTTCACCGTGCTGCAGTAGGCATAGTAGATTCGGATAAGGGCATATCTCTTCGATTCCCTCGTCTGGTTCGAGTTCGGGATGACAAAGCTCCTGAACAAGCCTCATCATCTGAGATGGTTGCTGAAATGTATTCTGCTCAAAAACACAATCACCCGAACAACCACGATGATGAAGAGGATTGA | 2397 | 0.4355 | MLSFRSCFSPPFFHPVKSLFRLEFSLTPPKTFLFKPIFLSAHNRCGNMSSRPSAFDALMSGARAAAKKKPQSSSPGKRKAPDSNSTQNPKTLKCTESTGQSLEPSNDTKSTDIKDSEKAQEPTKEHLSNGGLTGSEGALAAKRMRVVGSQEKITELKKKVSLLKKKPTDFDPSSMSCWEKGEPVPFLFLGLAFDMIAEETGRIVITDIVCNMLRTVMNTTPEDLVAVVYLSANKIATAHEGLELGIGDASIIKALAEACGRTEVQIKNQYKEKGDLGLVAKASRSSQAMMRKPDPLTIRKVFNTFRLIAKESGKDSHEKKKNHIKGLLVAATDCEPQYLIRLLQSKLRIGYAEQTLLAALGQAAVYTEGHSIPPPKVQSPLEEAAKIVKQVYSVLPVYDKIIPALLSGGVWKLPETCHFTLGVPVGPMLSKATKGVSEVLNKFQDAEFTCEYKYDGERAQVHYMDNGSVEIYSRNAERNTGKFPDVVAAISRVKKSSVSSFVLDCELVAYDREKKKILPFQVLSTRARKNVSMSDIKVDVCIFAFDILYLNGKPLLQENLKIRREHLYASFEEEPGFFQFATAITSNDVEEIQKFLDAAVDASCEGLIIKTLYEDATYEPSKRSLNWLKLKKDYLENIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEATLEERSASLRTKVIPKPKPYYRYAETINPDVWFEASEVWEVKAADLTISPVHRAAVGIVDSDKGISLRFPRLVRVRDDKAPEQASSSEMVAEMYSAQKHNHPNNHDDEED | 798 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci4g2677 | 798 | ProSitePatterns | ATP-dependent DNA ligase AMP-binding site. | 451 | 459 | IPR016059 | GO:0003909 | |
| Prci4g2677 | 798 | Gene3D | - | 636 | 797 | IPR012340 | - | |
| Prci4g2677 | 798 | Gene3D | - | 437 | 635 | - | - | |
| Prci4g2677 | 798 | NCBIfam | ATP-dependent DNA ligase | 243 | 782 | IPR000977 | GO:0003910|GO:0005524|GO:0071897 | |
| Prci4g2677 | 798 | FunFam | DNA ligase | 636 | 795 | - | - | |
| Prci4g2677 | 798 | Pfam | DNA ligase N terminus | 189 | 360 | IPR012308 | GO:0003677|GO:0003910|GO:0006281|GO:0006310 | |
| Prci4g2677 | 798 | Pfam | ATP dependent DNA ligase domain | 427 | 631 | IPR012310 | GO:0003910|GO:0005524|GO:0006281|GO:0006310 | |
| Prci4g2677 | 798 | SUPERFAMILY | ATP-dependent DNA ligase DNA-binding domain | 167 | 417 | IPR036599 | GO:0003677|GO:0003910|GO:0006281|GO:0006310 | |
| Prci4g2677 | 798 | MobiDBLite | consensus disorder prediction | 765 | 798 | - | - | |
| Prci4g2677 | 798 | MobiDBLite | consensus disorder prediction | 61 | 135 | - | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci4g2677 | K10747 | - | qsa:O6P43_028431 | 1201.42 |
Showing 1 to 1 of 1 entries