Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2670 ATGGAGAATCACCAGCAGCAAGCCCCACCCTCCTCCGGCTCCGCATACCCACCTCAGCCCCCTGCTCCTCCTCCTTCCTTCCACCACCTTCTTCAACAGCAGCAGCAACAGCTTCACACATTCTGGACCTACCAGCGCCAAGACATCGAGCATGTCAACGATTTCAAGAACCACCAGCTTCCTCTCGCTCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTTGAGCTCACCATTCGATCCTGGCTCCACGCCGAGGAGAACAAGAGGCGCACTCTCCAGAAGAACGATATCGCCGCCGCCATCACCCGCACTGATATTTTCGATTTCTTGGTTGATATTGTGCCCAGGGATGAGATCAAGGATGAGGCCGCCCTTGGTGTTGGTGGAATGGTGGGGCCCCCCGCCAGCGGTGTTCCTTACTACTATCCGTCTATCGGCCAACCTGCCGGTCCTCCCGGTGGCATGATGATTGGACGGCCGGCGGTGGATCCGACTGGAGTGTACGCCCAACCGCCTTCGCAAGCGTGGCAGTCAGTGTGGCAGACGGCGGCGGATGATGGGTCCTACGGCAGCGGCGGGAGCAGTGGACAGGGCAATCTTGATGGTCAGAGTTGA 678 0.59 MENHQQQAPPSSGSAYPPQPPAPPPSFHHLLQQQQQQLHTFWTYQRQDIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAALGVGGMVGPPASGVPYYYPSIGQPAGPPGGMMIGRPAVDPTGVYAQPPSQAWQSVWQTAADDGSYGSGGSSGQGNLDGQS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2670 225 MobiDBLite consensus disorder prediction 201 225 - -
Prci4g2670 225 Pfam Core histone H2A/H2B/H3/H4 1 122 IPR007125 GO:0003677
Prci4g2670 225 Gene3D Histone, subunit A 26 137 IPR009072 GO:0046982
Prci4g2670 225 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 32 154 - -
Prci4g2670 225 SUPERFAMILY Histone-fold 25 131 IPR009072 GO:0046982
Prci4g2670 225 MobiDBLite consensus disorder prediction 1 25 - -
Prci4g2670 225 FunFam Nuclear transcription factor Y subunit gamma 28 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2670 Prci-Chr4 38988935 38992836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2670 26 224 CCAAT-HAP5 Transcription Factor Family AT3G48590 88.670 1.51e-110 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci4g2670 Histone 8.9e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2670 - - pcin:129320575 330.102