Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2646 ATGGAAAAGATGAATTTTGTTAGAAATGGAGTGAGCAGATTGCCTCCTGGTTTTCGTTTCCAGCCTACGGATCATGAGCTGGTGTTTCAGTACTTGAAATGCAAGATCTTTTCCCTTCCCTTGCCTGCTTCCATCATTCCTGACCTCAATCTCTGCAACTTCGATCCTTGGGATTTGCCAGGTAACTCTGATGAAGAAGAGAGGTACTTTTTCAGCCCAAAGGGAGCCAAATATAGAAATGGGAATCGCATGAACCGAACAACCATATCTGGATATTGGAAGGCAACAGGATCCGACAAGAAAATCACGTCTTCATCAAGAAACAACGACATCGTCGGGATCAGAAAAGCCCTAGTTTTTTACGAAGGCAATTCCCCAAGCGGCTCTAAAACTGATTGGATCATGCACGAATACCGTCTTGTCACTGCTTCTTCTTCCAAGTCCGAGGAGGTAGGAGACTGGGTTCTGTGTCGGATCTTCCTCAAGAAAACAACAAATAATGGTGATACAAGGAGGACGAGGAGTCACGTGCAGGATAATAGTAATACTAGACAAGACATGGCAGATCAACCAAGATTCTTTGATTTCATGATGCTACAAAACCAGAACCTTCATGCTTCAACATCGCGGTCTTGTTCTAGCTCCAATGGCTGTACAGAGCTGTCTTCAAACTATGTATCAGATCATGAAGAAACAAGTGGATTTAAAGGTTTCTAA 717 0.4324 MEKMNFVRNGVSRLPPGFRFQPTDHELVFQYLKCKIFSLPLPASIIPDLNLCNFDPWDLPGNSDEEERYFFSPKGAKYRNGNRMNRTTISGYWKATGSDKKITSSSRNNDIVGIRKALVFYEGNSPSGSKTDWIMHEYRLVTASSSKSEEVGDWVLCRIFLKKTTNNGDTRRTRSHVQDNSNTRQDMADQPRFFDFMMLQNQNLHASTSRSCSSSNGCTELSSNYVSDHEETSGFKGF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2646 238 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Prci4g2646 238 SUPERFAMILY NAC domain 7 162 IPR036093 GO:0003677|GO:0006355
Prci4g2646 238 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Prci4g2646 238 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Prci4g2646 238 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2646 Prci-Chr4 38726729 38728714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2646 1 238 NAC Transcription Factor Family AT5G13180 50.196 5.14e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci4g2646 NAM 1.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2646 - - aprc:113868555 303.138