Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2643 ATGGGTTGCGTGCTTGGAACACCGGCGGATCGCCGAGGCCGATGGTCGGATTCCGGACCTCAGAATCGCCGTCGTCGCGGTAGTCAACGACATTCTGTCACTGACGGAGGTAATGCCGTTGTGGTTAGGAAGGAAGGGCCGGCGAGGGAGAAGGAGATACGGGGGACTCGGCATACAGGCGATTTCCCAGCGACTGTTCCGGCTCCGGAGAGACGTAAGCCTAGGCTTGATCCGTACGCTAAAACCGAACATGGTTGGCCGTCGTGGTTGATGGATGTGGCTGGTGACGCAATCCGAGATTGGTCTCCTCGTCGCGCCAACTCGTTCGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAATGTATATAAAGCTAGAGACCTTCTTACTGGAAGGATAGTGGCACTAAAGAAAGTTAGGTTTGATAATATGGAGCCAGAGAGTGTGAAGTTCATGGCAAGAGAAATTATTCTGTTGAGGCGGCTTGATCACCCCAATGTCTTAAAACTTGAAGGTTTGGTTACTTCAAGAATGTCATGCAGTCTATACTTGGTATTCGAGTATATGGAACACGATCTTGCTGGACTCGCAGCTCGTCAAGGTGTTAAGTTTACCGAGCCTCAGGTCAAATGCTATATGAAGCAGTTACTCTCTGGCCTTGAGCATTGCCACAGTCAAGGTGTTCTGCACCGCGATATCAAGGGTTCCAATTTGCTCATTAATAATGACGGAATCCTTAAAATAGCAGATTTTGGCTTGGCTACTTTTTATGATCCTGAGAAAAAACAGCCCATGACAAGTAGAGTTGTCACTCTATGGTACCGGCCTCCTGAGCTTCTTCTTGGGGCTACACTCTATGGTGTTGGTGTTGACCTTTGGAGTGCTGGCTGCATCTTGGCAGAGCTGCTTGCAGGGAAGCCAATCATGCCAGGCCGGACAGAGGTTGAACAACTGCACAAAATATTTAAATTATGTGGCTCTCCATCTGAAGAATATTGGAAGAAGCATAGATTGCCAAATGCCATACTCTTTAAGCCACAGCAGCCTTACAAACGTTGCCTTTCAGAAACCTTCAAGGATTTCCCGCCTTCTTCTTTGCCTCTAATTGAAACTCTTCTTGCAATAGATCCAGATGATCGTGGCACTGCCTCAGCTGCTCTGCGTAGTGAATTCTTTGCGACTGAGCCTTATGCTTGTGAACCATCAAGTTTACCGAAGTATCCTCCCAGCAAAGAATTGGATGTAAAACTGAGAGATGAAGAAGCAAGAAGGCGAAAAGCTCAATGTGGGAAAGCTAATGCTGTTGATGGTGCTCGAAGAGTCAGAGCACGTGATCGAGGCCGGGCCATTCCAGCTCCAGATGCCAATGCGGAACTGCAAACAAACATAGATAAGTGGAGAGCCGTGACCCATGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCTCCACATCAGGATGGAGCTGTTGGTTATACATTAGATTCATCTCATAAAGGACCTGTTTCCTTTGGTGCGACTGGTGCTTCCTTTGGCTCAGCAATTTTCAATTCAAAACTATCAGGATCTAGAAATCACGCTCCTAGTGCTACAAGACCTCACAAAGGGAGGAAAACTAATAAAGCAGACTCCCAGGTGGCGTCATCATGGAAATTTGTGCGAGCCTTCAAGCCATCATCAATAGGCCCGTCAATGAACTTATTATTTCGTAGCAAATAA 1722 0.4715 MGCVLGTPADRRGRWSDSGPQNRRRRGSQRHSVTDGGNAVVVRKEGPAREKEIRGTRHTGDFPATVPAPERRKPRLDPYAKTEHGWPSWLMDVAGDAIRDWSPRRANSFEKLAKIGQGTYSNVYKARDLLTGRIVALKKVRFDNMEPESVKFMAREIILLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAARQGVKFTEPQVKCYMKQLLSGLEHCHSQGVLHRDIKGSNLLINNDGILKIADFGLATFYDPEKKQPMTSRVVTLWYRPPELLLGATLYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKHRLPNAILFKPQQPYKRCLSETFKDFPPSSLPLIETLLAIDPDDRGTASAALRSEFFATEPYACEPSSLPKYPPSKELDVKLRDEEARRRKAQCGKANAVDGARRVRARDRGRAIPAPDANAELQTNIDKWRAVTHANAKSKSEKFPPPHQDGAVGYTLDSSHKGPVSFGATGASFGSAIFNSKLSGSRNHAPSATRPHKGRKTNKADSQVASSWKFVRAFKPSSIGPSMNLLFRSK 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2643 573 MobiDBLite consensus disorder prediction 16 31 - -
Prci4g2643 573 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Prci4g2643 573 SUPERFAMILY Protein kinase-like (PK-like) 103 398 IPR011009 -
Prci4g2643 573 MobiDBLite consensus disorder prediction 519 547 - -
Prci4g2643 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Prci4g2643 573 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2643 573 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Prci4g2643 573 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2643 573 MobiDBLite consensus disorder prediction 44 58 - -
Prci4g2643 573 CDD STKc_CDK9_like 109 393 - -
Prci4g2643 573 MobiDBLite consensus disorder prediction 1 79 - -
Prci4g2643 573 FunFam probable serine/threonine-protein kinase At1g54610 192 433 - -
Prci4g2643 573 Gene3D Transferase(Phosphotransferase) domain 1 192 433 - -
Prci4g2643 573 MobiDBLite consensus disorder prediction 474 495 - -
Prci4g2643 573 Gene3D Phosphorylase Kinase; domain 1 95 191 - -
Prci4g2643 573 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2643 573 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2643 Prci-Chr4 38708440 38712767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2643 101 429 Core Cell Cycle Gene Families AT5G10270 51.136 5.96e-115 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci4g2643 Pkinase 3.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2643 K08819 - gmx:100807756 918.687