Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2642 ATGGATGACGGCTGTCAACATGAAAATGGTAGGCACAAGGTGGACTATTACAGAGGAGCACATTCCCCGTGGAATTTGGCTCCTCAACATCAAGCAAAGGAACCAAATGCCTTAGTTATGAATAAGAAAATTATGTCCATCATAGCTGAAAGGGAAGCTGCTATTCGAGAACGAAATGCAGCGTTATCTGAAAAGAATGAAGCCTTGGCTGCTCGCGATGAAGCCCTTCGGCAGAGGGATGAAGCACTCGTTCAGAGGGATAGTGCCATAATGGAACGAGATAATGCCCTTGCTGCCCTTCAAATCCGGGATAATGCTGTCAACTTCCAATTGGGTGGTGGAATTCAACGTGGATCAAAGCGAATGCACCATTCCTCAAACCATCTTGTTGAAATGGCAGAAGCAGCATACAGCACAAAGGATACTACCATAACTGAGGCCTTCCCTGTGACTGTAATAAATTCTGAAGCTGTTAAATCTCATCAGGCCAAGAGAAAAAAGGAAGACAAGGAAATTTCTTCTAAGGTGTTGAAGAGCAAAGGAAAGAAAATGGGTGAGGATTTAAATAGGTCAGCTTCTTCTGAAGGAACTAAAATTAAATCCGAGTGGGACAGACAGGATGTTGGCTTGAATTTGGTTACATTTGATGAAACTACCATGCCACCCCCAGTTTGCACATGCACTGGAGTACCACGGCAGTGCTACAAATGGGGAAATGGCGGATGGCAGTCATCCTGTTGTACCACCTCCTTGTCAATGTATCCGTTGCCACAGCTTCCAAACAAGCGCCATTCTCGAATTGGTGGCCGAAAGATGAGTGGAAGTGTCTTTACAAGACTGCTCAGTAAGGTAGCTGCAGAAGGCCGAGATTTATCTATGCCATTGGATCTCAAGGACTACTGGGCAAGACATGGAACAAATCGCTACATCACGATCAAGTAG 942 0.4512 MDDGCQHENGRHKVDYYRGAHSPWNLAPQHQAKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNEALAARDEALRQRDEALVQRDSAIMERDNALAALQIRDNAVNFQLGGGIQRGSKRMHHSSNHLVEMAEAAYSTKDTTITEAFPVTVINSEAVKSHQAKRKKEDKEISSKVLKSKGKKMGEDLNRSASSEGTKIKSEWDRQDVGLNLVTFDETTMPPPVCTCTGVPRQCYKWGNGGWQSSCCTTSLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSKVAAEGRDLSMPLDLKDYWARHGTNRYITIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2642 313 MobiDBLite consensus disorder prediction 161 189 - -
Prci4g2642 313 Pfam GAGA binding protein-like family 1 313 IPR010409 -
Prci4g2642 313 SMART GAGA_bind_2 1 313 IPR010409 -
Prci4g2642 313 MobiDBLite consensus disorder prediction 161 200 - -
Prci4g2642 313 Coils Coil 59 79 - -
Prci4g2642 313 PANTHER - 1 313 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2642 Prci-Chr4 38703576 38706783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2642 1 313 BBR or BPC Transcription factor family AT2G21240 60.952 1.21e-136 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Prci4g2642 GAGA_bind 3e-100 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2642 - - jre:108986984 536.954