Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2627 ATGCTATGCCTTCTAGAAGGATCAATGGATGATCCAAAATGCGATTCACCTCCTGTGCAAACAACAGAACTTAGTTTGTGGGAAAGGCTTGGCAATGCTGCTATGTTGGACATTGAATCTAGCTCTTTTTCTTGGGAGAGGATCTCTTCACTGCATCACACTGAACACAGCAGCAGCACCGAACATTCTGAGGATGAAATGAACAAAGCTCTTGAGGTAACCGTAAATTCTGGGGGAGTTGTCTTCTTTGCCTTTTTTAATTGCCTTGGGAGTGATGATACTTCTCCGAAGGAGGAAGCTGCTGTAATAAAAATATCATCATCAAGAATGGCAACACAATCTGAGCGCCTTGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCTCAGGGTAGAGTTATTCACAATACCAGTCCAGAGTGGCTCCAAATAAAGGAAGCTGCGGAAAAAGCTAGAAATAGAGCATTTGCTGAAGGAGATGAAGTTGGTGAAATGACTTGTTTAGAACTTTTGGAAGCACTTGAGCTTAGTCGGTGCCTCTTTTTTATGAGTTATATACATGGGTCACCTTTACTAGAAAGTTCAAGTGCATTTGAGTCTCGGGAATCTGCTGAAAGAACAGCAGCAGCCCTTGGCAGGGTATTGTTGCTAGACCTTGTCATCAGAAATGAAGATAGGCTCCCCTGCCGTCAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGGCTGAAAAGATGATGTCTGCAACCACTAACTCACTAGAAAAGGCCTTAGATTCTGCAATGAATCAATATAGACCAAGGGTGACAAGGGCACTTCGAAAAGAAAGAAGATCAACTTCAGTAGGTATCAGAATGAGTTCTAATAATTCTGGATTGTTTTCCCAGGCCTCTGATACCTCTGATATCTCAGAATCACCAAGTTGTAGTGACATGAGCCTTGAAAGTCAAACATCTAGTGAACCACAATGTACTGACATTGTGGCTATTGATTCTGGTGTCCCTCGCCGGCCCCCTGCTGGAAAACGTGCAGATGATCAGGCTAATTATCCTAAGTTGGTTGAGCTACTAATCAATAGTTCTGGGTTTTGCTCTAACCTGTTACATGATGTCACTGGAGGAAAATTAGGTTCTCCTTCACTAGAAGAAATTAATACAACCACTGATGTACATGCAAGTGAGACAGCATCAGTAGTTCATGAGTTCCGTAGTGGTTTCCGCGCTGCTCTTAGAGATCTGCAGGGATTTCATATTTTCCAACTTACTCTACACCAAAAGCTTGATACCTTATTACGGTCATTTATGAACATCGTAAACAAAATATCACCAGGGGAATCTGACAAAGAGGATTCGATGGTTCCTGATTCACCTTCACTAACTGCTGGAGATGGTAACTGTCCATCTCCAGCAAACAAGGATAGGACTGTAACTGAAAACCATCCAGATTATGGTGATTCAGAATTACAAAGAACTGCTCCAAGGGCATCATGGTTAGGGAATAAAGAACACTCCGATGCTGCTTCTCCTATGTTGAGGGAAGGTTGGCATGGAAAGTCTTATAAAGGAAGTGGAGATTCACTTCGTAGTAGTCTTCGCTTGACGGCAAAGCTACGCGACTTCCATAAATATGCAAAGGTCGATGCTGAATCTAACAAAGAATTAGAACAGTGGAATGAAACACTTAAAAGTGATGCCATCAAGTTATGCCAGGACAACAATTTCAATACCGGATTTTTTGAGTGCAGCGACAATAACAGTGTTGTTGATGCATATGAACTGAAGGTCAGGCTTGAGCACATTCTTGAAAGGATTACATTAATCTCCGAGGCTGCAAATACAGAGAAGCCATCTGCTGTTACAAATAGTCTATTCATTGGTGGAGCACTGGCTGCAAGATCTGTATATACACTGCAACACTTGGGAATCACGCATATTCTGTGTTTGTGCACCAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGAGTACAAAAATTTCTATGTTTGTGACGATGTAGATTCTAACATCAGCAGCATATTTGAAGAAGCCTGTGATTTTATAGATCGTGTTGAACAGAAAGGCCAGAGAATTTTAGTTCATTGCTTTGAAGGGAGAAGCAGAAGCGTCACGTTGGTCCTTGCTTACTTAATGCTCAGGAAGAAGTTCACCTTGGTAGAAGCATGGAACACACTGAAACGAGTTCATCGTCGAGCACAACCGAACGATGGCTTTGCAAAGATCTTACAGGAACTGGATGAGAAACTGCATGGAAAGGTTTCCATGGAGTGGCAGCAAAGGAAACCAATGATGAAAGTTTGTCCAATATGTGGAAAAAATGCAGGACTAAGCAGCAGCTCGCTTAAGCTGCATCTGCAGAAATCCCATAAAAAGCTATCATCAGGGAGTGTGGACAGTGCCATGACAATGGAGATCCAGAAGGCTTTAACAGCTTTGAAAATTAGTCGTGGCGGGAGTGTCAGCCCCACGCAGAGGCAGCCTGCCTAG 2520 0.4262 MLCLLEGSMDDPKCDSPPVQTTELSLWERLGNAAMLDIESSSFSWERISSLHHTEHSSSTEHSEDEMNKALEVTVNSGGVVFFAFFNCLGSDDTSPKEEAAVIKISSSRMATQSERLGYEFAKWLGVQTPQGRVIHNTSPEWLQIKEAAEKARNRAFAEGDEVGEMTCLELLEALELSRCLFFMSYIHGSPLLESSSAFESRESAERTAAALGRVLLLDLVIRNEDRLPCRQLRWRGNSANLLLAEKMMSATTNSLEKALDSAMNQYRPRVTRALRKERRSTSVGIRMSSNNSGLFSQASDTSDISESPSCSDMSLESQTSSEPQCTDIVAIDSGVPRRPPAGKRADDQANYPKLVELLINSSGFCSNLLHDVTGGKLGSPSLEEINTTTDVHASETASVVHEFRSGFRAALRDLQGFHIFQLTLHQKLDTLLRSFMNIVNKISPGESDKEDSMVPDSPSLTAGDGNCPSPANKDRTVTENHPDYGDSELQRTAPRASWLGNKEHSDAASPMLREGWHGKSYKGSGDSLRSSLRLTAKLRDFHKYAKVDAESNKELEQWNETLKSDAIKLCQDNNFNTGFFECSDNNSVVDAYELKVRLEHILERITLISEAANTEKPSAVTNSLFIGGALAARSVYTLQHLGITHILCLCTNEIGQSDSQFPDLFEYKNFYVCDDVDSNISSIFEEACDFIDRVEQKGQRILVHCFEGRSRSVTLVLAYLMLRKKFTLVEAWNTLKRVHRRAQPNDGFAKILQELDEKLHGKVSMEWQQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQPA 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2627 839 MobiDBLite consensus disorder prediction 443 528 - -
Prci4g2627 839 MobiDBLite consensus disorder prediction 284 326 - -
Prci4g2627 839 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 675 738 IPR000387 GO:0016311|GO:0016791
Prci4g2627 839 Gene3D Protein tyrosine phosphatase superfamily 599 772 IPR029021 -
Prci4g2627 839 MobiDBLite consensus disorder prediction 276 326 - -
Prci4g2627 839 CDD DSP 618 755 - -
Prci4g2627 839 FunFam Dual specificity protein phosphatase PHS1 589 763 - -
Prci4g2627 839 ProSiteProfiles Dual specificity protein phosphatase domain profile. 617 762 IPR020422 GO:0006470|GO:0008138
Prci4g2627 839 Pfam Actin-fragmin kinase, catalytic 23 318 IPR015275 -
Prci4g2627 839 SUPERFAMILY Protein kinase-like (PK-like) 16 349 IPR011009 -
Prci4g2627 839 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 617 762 IPR029021 -
Prci4g2627 839 Gene3D - 191 301 IPR036940 -
Prci4g2627 839 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 14 837 IPR035010 GO:0004721|GO:0009737|GO:0043622
Prci4g2627 839 SMART dsp_5 617 759 IPR020422 GO:0006470|GO:0008138
Prci4g2627 839 Pfam Dual specificity phosphatase, catalytic domain 630 757 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2627 Prci-Chr4 38562643 38570150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2627 11 828 Protein tyrosine phosphatase (PTP) family AT5G23720 66.908 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2627 K14165 - jre:109000311 1209.13