Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2626 ATGGCAAAACGGCAAAGTCACGACCCTGCAATCATCAACCCTCTTACACTCCAGGGCAAAGGCGAAGATAGGGTATCGGAACTTGGATCTGACGAGCCTGAGGCCCCATTGCCTCTCACTGCTACTTCCCGGGTCTTGTATATGTTGGGAGATATAGCGGCAGGGCCTGCGTTTAGGTTTACGCAATGGCTCGAATCGGTTCGTAAACGCACTGCCAGAAATCGTTCATCCGGCTTCCCGCACCGCCTTACGAGGCTTCCCGATGCTATGCCTTCTAGTGCAGAAGGATCAATGGATGATCCAAAATGCGATTCACCTCCTGTGCAAACAACAGAACTTAGTTTGTGGGAAAGGCTTGGCAATGCTGCTATGTTGGACATTGAATCTAGCTCTTTTTCTTGGGAGAGGATCTCTTCACTGCATCACACTGAACACAGCAGCAGCACCGAACATTCTGAGGATGAAATGAACAAAGCTCTTGAGGTAACCGTAAATTCTGGGGGAGTTGTCTTCTTTGCCTTTTTTAATTGCCTTGGGAGTGATGATACTTCTCCGAAGGAGGAAGCTGCTGTAATAAAAATATCATCATCAAGAATGGCAACACAATCTGAGCGCCTTGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCTCAGGGTAGAGTTATTCACAATACCAGTCCAGAGTGGCTCCAAATAAAGGAAGCTGCGGAAAAAGCTAGAAATAGAGCATTTGCTGAAGGAGATGAAGTTGGTGAAATGACTTGTTTAGAACTTTTGGAAGCACTTGAGCTTAGTCGGTGCCTCTTTTTTATGAGTTATATACATGGGTCACCTTTACTAGAAAGTTCAAGTGCATTTGAGTCTCGGGAATCTGCTGAAAGAACAGCAGCAGCCCTTGGCAGGGTATTGTTGCTAGACCTTGTCATCAGAAATGAAGATAGGCTCCCCTGCCGTCAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGGCTGAAAAGATGATGTCTGCAACCACTAACTCACTAGAAAAGGCCTTAGATTCTGCAATGAATCAATATAGACCAAGGGTGACAAGGGCACTTCGAAAAGAAAGAAGATCAACTTCAGTAGGTATCAGAATGAGTTCTAATAATTCTGGATTGTTTTCCCAGGCCTCTGATACCTCTGATATCTCAGAATCACCAAGTTGTAGTGACATGAGCCTTGAAAGTCAAACATCTAGTGAACCACAATGTACTGACATTGTGGCTATTGATTCTGGTGTCCCTCGCCGGCCCCCTGCTGGAAAACGTGCAGATGATCAGGCTAATTATCCTAAGTTGGTTGAGCTACTAATCAATAGTTCTGGGTTTTGCTCTAACCTGTTACATGATGTCACTGGAGGAAAATTAGGTTCTCCTTCACTAGAAGAAATTAATACAACCACTGATGTACATGCAAGTGAGACAGCATCAGTAGTTCATGAGTTCCGTAGTGGTTTCCGCGCTGCTCTTAGAGATCTGCAGGGATTTCATATTTTCCAACTTACTCTACACCAAAAGCTTGATACCTTATTACGGTCATTTATGAACATCGTAAACAAAATATCACCAGGGGAATCTGACAAAGAGGATTCGATGGTTCCTGATTCACCTTCACTAACTGCTGGAGATGGTAACTGTCCATCTCCAGCAAACAAGGATAGGACTGTAACTGAAAACCATCCAGATTATGGTGATTCAGAATTACAAAGAACTGCTCCAAGGGCATCATGGTTAGGGAATAAAGAACACTCCGATGCTGCTTCTCCTATGTTGAGGGAAGGTTGGCATGGAAAGTCTTATAAAGGAAGTGGAGATTCACTTCGTAGTAGTCTTCGCTTGACGGCAAAGCTACGCGACTTCCATAAATATGCAAAGGTCGATGCTGAATCTAACAAAGAATTAGAACAGTGGAATGAAACACTTAAAAGTGATGCCATCAAGTTATGCCAGGACAACAATTTCAATACCGGATTTTTTGAGTGCAGCGACAATAACAGTGTTGTTGATGCATATGAACTGAAGGTCAGGCTTGAGCACATTCTTGAAAGGATTACATTAATCTCCGAGGCTGCAAATACAGAGAAGCCATCTGCTGTTACAAATAGTCTATTCATTGGTGGAGCACTGGCTGCAAGATCTGTATATACACTGCAACACTTGGGAATCACGCATATTCTGTGTTTGTGCACCAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGAGTACAAAAATTTCTATGTTTGTGACGATGTAGATTCTAACATCAGCAGCATATTTGAAGAAGCCTGTGATTTTATAGATCGTGTTGAACAGAAAGGCCAGAGAATTTTAGTTCATTGCTTTGAAGGGAGAAGCAGAAGCGTCACGTTGGTCCTTGCTTACTTAATGCTCAGGAAGAAGTTCACCTTGGTAGAAGCATGGAACACACTGAAACGAGTTCATCGTCGAGCACAACCGAACGATGGCTTTGCAAAGATCTTACAGGAACTGGATGAGAAACTGCATGGAAAGGTTTCCATGGAGTGGCAGCAAAGGAAACCAATGATGAAAGTTTGTCCAATATGTGGAAAAAATGCAGGACTAAGCAGCAGCTCGCTTAAGCTGCATCTGCAGAAATCCCATAAAAAGCTATCATCAGGGAGTGTGGACAGTGCCATGACAATGGAGATCCAGAAGGCTTTAACAGCTTTGAAAATTAGTCGTGGCGGGAGTGTCAGCCCCACGCAGAGGCAGCCTGCCTAG 2787 0.4377 MAKRQSHDPAIINPLTLQGKGEDRVSELGSDEPEAPLPLTATSRVLYMLGDIAAGPAFRFTQWLESVRKRTARNRSSGFPHRLTRLPDAMPSSAEGSMDDPKCDSPPVQTTELSLWERLGNAAMLDIESSSFSWERISSLHHTEHSSSTEHSEDEMNKALEVTVNSGGVVFFAFFNCLGSDDTSPKEEAAVIKISSSRMATQSERLGYEFAKWLGVQTPQGRVIHNTSPEWLQIKEAAEKARNRAFAEGDEVGEMTCLELLEALELSRCLFFMSYIHGSPLLESSSAFESRESAERTAAALGRVLLLDLVIRNEDRLPCRQLRWRGNSANLLLAEKMMSATTNSLEKALDSAMNQYRPRVTRALRKERRSTSVGIRMSSNNSGLFSQASDTSDISESPSCSDMSLESQTSSEPQCTDIVAIDSGVPRRPPAGKRADDQANYPKLVELLINSSGFCSNLLHDVTGGKLGSPSLEEINTTTDVHASETASVVHEFRSGFRAALRDLQGFHIFQLTLHQKLDTLLRSFMNIVNKISPGESDKEDSMVPDSPSLTAGDGNCPSPANKDRTVTENHPDYGDSELQRTAPRASWLGNKEHSDAASPMLREGWHGKSYKGSGDSLRSSLRLTAKLRDFHKYAKVDAESNKELEQWNETLKSDAIKLCQDNNFNTGFFECSDNNSVVDAYELKVRLEHILERITLISEAANTEKPSAVTNSLFIGGALAARSVYTLQHLGITHILCLCTNEIGQSDSQFPDLFEYKNFYVCDDVDSNISSIFEEACDFIDRVEQKGQRILVHCFEGRSRSVTLVLAYLMLRKKFTLVEAWNTLKRVHRRAQPNDGFAKILQELDEKLHGKVSMEWQQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQPA 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2626 928 Pfam Dual specificity phosphatase, catalytic domain 719 846 IPR000340 GO:0008138|GO:0016311
Prci4g2626 928 Pfam Actin-fragmin kinase, catalytic 112 407 IPR015275 -
Prci4g2626 928 SMART dsp_5 706 848 IPR020422 GO:0006470|GO:0008138
Prci4g2626 928 Gene3D Protein tyrosine phosphatase superfamily 688 861 IPR029021 -
Prci4g2626 928 MobiDBLite consensus disorder prediction 74 108 - -
Prci4g2626 928 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 25 926 IPR035010 GO:0004721|GO:0009737|GO:0043622
Prci4g2626 928 MobiDBLite consensus disorder prediction 373 415 - -
Prci4g2626 928 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 706 851 IPR029021 -
Prci4g2626 928 FunFam Dual specificity protein phosphatase PHS1 678 852 - -
Prci4g2626 928 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 764 827 IPR000387 GO:0016311|GO:0016791
Prci4g2626 928 Gene3D - 280 534 IPR036940 -
Prci4g2626 928 MobiDBLite consensus disorder prediction 532 616 - -
Prci4g2626 928 MobiDBLite consensus disorder prediction 1 36 - -
Prci4g2626 928 CDD DSP 707 844 - -
Prci4g2626 928 SUPERFAMILY Protein kinase-like (PK-like) 62 438 IPR011009 -
Prci4g2626 928 ProSiteProfiles Dual specificity protein phosphatase domain profile. 706 851 IPR020422 GO:0006470|GO:0008138
Prci4g2626 928 MobiDBLite consensus disorder prediction 365 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2626 Prci-Chr4 38562643 38570960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2626 18 917 Protein tyrosine phosphatase (PTP) family AT5G23720 66.374 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2626 K14165 - jre:109000311 1302.35