Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci4g2610 | ATGTCGGCCATGGTTTCTGCTCTTGCTCAAGTCATTGGGGCTTCCCCTAATGCTTACAATCACGATCATCCCTTGGCCGTGTCTCAGTCCGGTTCTCAACATAACAGTACTGATCAATGTCTTCAAGCATTTCAACAACATGAAGAAAGCAGCACGAGGAAGAGACACTACAGGGGAGTGAGGCAAAGGCCATGGGGGAAATGGGCGGCTGAGATTCGAGATCCCAAGAAAGCCGCCAGAGTTTGGCTCGGAACCTTCGACACCGCCGAGGCCGCCGCCCTCGCCTACGACGAAGCCGCTCTTAGATTCAAAGGAAGCAAAGCTAAGCTCAATTTCCCCGAAAGAGTTCAACTTCAGCCACCTTCCACAACGACGTCGTCTTCCTCTTCTTCCTCAGCTCAATTTTCTTTCCTCACGCAACCACCACTCGCTCTTGCTCCTCCAACGATGCCGTTCTCTTCACAACAACCTTATCATGATCATAATTACCAATATCATCATCAACTTCATCTGATGGCAAGTGGTGGGACGAGCCAGAATTTGAATTATGGTACTCATGTGCGGCCTGGATTTTATGGGAGAGACATGTTTCATTCTTCTGATCACCAGCAACAACCTTATACGGCTGTGTCTTCCTCGTCTTCCTCGTCTGGAATGTCTCACCAGCAACAAGAACAAGAAGAGCTTCTACAGTTTTCGATGCAATTTGGAGGTTCTTCGTCTTCTAGTTCTCATCCTCATTCGAATTGGACGTATCATGAATTTGATGGTAAACGTTGA | 780 | 0.4795 | MSAMVSALAQVIGASPNAYNHDHPLAVSQSGSQHNSTDQCLQAFQQHEESSTRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGSKAKLNFPERVQLQPPSTTTSSSSSSSAQFSFLTQPPLALAPPTMPFSSQQPYHDHNYQYHHQLHLMASGGTSQNLNYGTHVRPGFYGRDMFHSSDHQQQPYTAVSSSSSSSGMSHQQQEQEELLQFSMQFGGSSSSSSHPHSNWTYHEFDGKR | 259 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci4g2610 | 259 | MobiDBLite | consensus disorder prediction | 198 | 250 | - | - | |
Prci4g2610 | 259 | CDD | AP2 | 56 | 114 | IPR001471 | GO:0003700|GO:0006355 | |
Prci4g2610 | 259 | ProSiteProfiles | AP2/ERF domain profile. | 56 | 113 | IPR001471 | GO:0003700|GO:0006355 | |
Prci4g2610 | 259 | Gene3D | AP2/ERF domain | 55 | 115 | IPR036955 | GO:0003700|GO:0006355 | |
Prci4g2610 | 259 | PRINTS | Ethylene responsive element binding protein signature | 57 | 68 | IPR001471 | GO:0003700|GO:0006355 | |
Prci4g2610 | 259 | PRINTS | Ethylene responsive element binding protein signature | 79 | 95 | IPR001471 | GO:0003700|GO:0006355 | |
Prci4g2610 | 259 | PANTHER | DNA-BINDING DOMAIN | 36 | 227 | IPR044808 | GO:0003700|GO:0009873 | |
Prci4g2610 | 259 | MobiDBLite | consensus disorder prediction | 194 | 259 | - | - | |
Prci4g2610 | 259 | Pfam | AP2 domain | 56 | 105 | IPR001471 | GO:0003700|GO:0006355 | |
Prci4g2610 | 259 | SMART | rav1_2 | 56 | 119 | IPR001471 | GO:0003700|GO:0006355 | |
Prci4g2610 | 259 | SUPERFAMILY | DNA-binding domain | 56 | 114 | IPR016177 | GO:0003677 | |
Prci4g2610 | 259 | FunFam | Ethylene-responsive transcription factor 2 | 55 | 114 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci4g2610 | Prci-Chr4 | 38355096 | 38357677 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci4g2610 | 1 | 128 | AP2-EREBP Transcription Factor Family | AT5G61890 | 63.846 | 2.61e-47 | 156 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Prci4g2610 | AP2 | 5.2e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci4g2610 | - | - | pcin:129308292 | 461.455 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci4g2610 | 4 | 38355096 | 38357677 | Prci4g2610 | 4 | 38355096 | 38357677 | ECH |