Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2610 ATGTCGGCCATGGTTTCTGCTCTTGCTCAAGTCATTGGGGCTTCCCCTAATGCTTACAATCACGATCATCCCTTGGCCGTGTCTCAGTCCGGTTCTCAACATAACAGTACTGATCAATGTCTTCAAGCATTTCAACAACATGAAGAAAGCAGCACGAGGAAGAGACACTACAGGGGAGTGAGGCAAAGGCCATGGGGGAAATGGGCGGCTGAGATTCGAGATCCCAAGAAAGCCGCCAGAGTTTGGCTCGGAACCTTCGACACCGCCGAGGCCGCCGCCCTCGCCTACGACGAAGCCGCTCTTAGATTCAAAGGAAGCAAAGCTAAGCTCAATTTCCCCGAAAGAGTTCAACTTCAGCCACCTTCCACAACGACGTCGTCTTCCTCTTCTTCCTCAGCTCAATTTTCTTTCCTCACGCAACCACCACTCGCTCTTGCTCCTCCAACGATGCCGTTCTCTTCACAACAACCTTATCATGATCATAATTACCAATATCATCATCAACTTCATCTGATGGCAAGTGGTGGGACGAGCCAGAATTTGAATTATGGTACTCATGTGCGGCCTGGATTTTATGGGAGAGACATGTTTCATTCTTCTGATCACCAGCAACAACCTTATACGGCTGTGTCTTCCTCGTCTTCCTCGTCTGGAATGTCTCACCAGCAACAAGAACAAGAAGAGCTTCTACAGTTTTCGATGCAATTTGGAGGTTCTTCGTCTTCTAGTTCTCATCCTCATTCGAATTGGACGTATCATGAATTTGATGGTAAACGTTGA 780 0.4795 MSAMVSALAQVIGASPNAYNHDHPLAVSQSGSQHNSTDQCLQAFQQHEESSTRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGSKAKLNFPERVQLQPPSTTTSSSSSSSAQFSFLTQPPLALAPPTMPFSSQQPYHDHNYQYHHQLHLMASGGTSQNLNYGTHVRPGFYGRDMFHSSDHQQQPYTAVSSSSSSSGMSHQQQEQEELLQFSMQFGGSSSSSSHPHSNWTYHEFDGKR 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2610 259 MobiDBLite consensus disorder prediction 198 250 - -
Prci4g2610 259 CDD AP2 56 114 IPR001471 GO:0003700|GO:0006355
Prci4g2610 259 ProSiteProfiles AP2/ERF domain profile. 56 113 IPR001471 GO:0003700|GO:0006355
Prci4g2610 259 Gene3D AP2/ERF domain 55 115 IPR036955 GO:0003700|GO:0006355
Prci4g2610 259 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Prci4g2610 259 PRINTS Ethylene responsive element binding protein signature 79 95 IPR001471 GO:0003700|GO:0006355
Prci4g2610 259 PANTHER DNA-BINDING DOMAIN 36 227 IPR044808 GO:0003700|GO:0009873
Prci4g2610 259 MobiDBLite consensus disorder prediction 194 259 - -
Prci4g2610 259 Pfam AP2 domain 56 105 IPR001471 GO:0003700|GO:0006355
Prci4g2610 259 SMART rav1_2 56 119 IPR001471 GO:0003700|GO:0006355
Prci4g2610 259 SUPERFAMILY DNA-binding domain 56 114 IPR016177 GO:0003677
Prci4g2610 259 FunFam Ethylene-responsive transcription factor 2 55 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2610 Prci-Chr4 38355096 38357677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2610 1 128 AP2-EREBP Transcription Factor Family AT5G61890 63.846 2.61e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci4g2610 AP2 5.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2610 - - pcin:129308292 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2610 4 38355096 38357677 Prci4g2610 4 38355096 38357677 ECH