Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2573 ATGAAGAAATCGAGCTCATCTACTTTACCATCAAAACCCACATGGGTTCTTCCCCATCGGACCCAAATCCTCACAGAGCTTTACACATTGGGCAGGAAACTTGGTCAAGGTCAATTTGGTACTACTTTCCTTTGTACGGAGAAGTGCACAGGTCGCAGATATGCCTGCAAGTCAATTCCGAAGCGCAAGCTCATCTGCAAAGAGGATTATGATGATGTTTGGAGAGAGATTCAGATAATGCACCACTTGTCCGAACATCCTTATGTGGTAAGAATTCATGGTACCTATGAGGACTATGTTTCTGTTCACTTGGTGATGGAGCTGTGCGAAGGTGGAGAGTTGTTCGATAGGATTGTGCAGAAAGGGCATTACAGTGAGAGGCAAGCGGCCAAGATAATCCGAACCATCGTTGAAGTTGTAGAAGCTTGTCATTCTCTTGGGGTTATGCACAGAGATCTTAAACCAGAGAACTTCTTATTCGATAGCGTCGAAGAGGATGCCAAACTTAAGGCAACTGATTTCGGGCTGTCTGTTTTTTACAAGCCAGAGGTGTTACGCAAACATTATGGACCTGAATCAGATGTGTGGAGTGCAGGGGTTATTTTGTACATTTTACTTAGTGGGGTGCCACCATTTTGGGCCGAAACTGAAACAGGGATCTTCCGACAGATTTTGGAAGGAAAAATTGATTTTCAGTCTGAACCATGGCCTAGCATTTCAGACAGTGCAAAGGATCTAATTAGAAAAATGCTTGAGCAAAATCCCAAAAAAAGGCTTACAGCCCATGAAGTACTCCGCCACCCGTGGATTGTTGATGACAACATTGCACCAGATAAACCTCTTGATTCTGCTGTTTTATCACGCTTGAAGCAGTTCTCTGCAATGAATAAGCTCAAAAAGATGGCTTTGCGAGTCATAGCTGAGAGGCTCTCTGAGGAAGAAATAGGCGGACTGAGGGAGTTATTCAAAATGATCGACACAGACAACAGCGGAAACATAACGTTTGACGAGCTAAAAGATGGTTTAAGGCGAGTAGGATCCGACCTTATGGAGTCTGAAATCAAGGATCTTATGGATGCAGCTGATATTGATAATAGTGGGACCATTAGTTATGGCGAATTCATTGCTGCTACTATACACTTGAATAAGCTGGAGAGGGAAGAGAATCTGCTATCAGCTTTCTCCTATTTTGACAAAGATGGAAGTGGCTACATAACTATTGATGAGATTCAACAGGCTTGTAAAGAGTTTGGTCTAAATGATTTCCCTATAGATGAAATAATCAAGGAAATCGATCAGGATAATGATGGTCAAATAGATTATGGGGAATTTGCTGCGATGATGAGAAAGGGTAATGGAGGAGGGGTTGGAAGGCGAACAATGAGGAAGACTTTGAATTTCAGGGATGCTTTTGGATTGATAGGCAATGGTTCTAATGATTCTCAGCTTTAG 1452 0.4256 MKKSSSSTLPSKPTWVLPHRTQILTELYTLGRKLGQGQFGTTFLCTEKCTGRRYACKSIPKRKLICKEDYDDVWREIQIMHHLSEHPYVVRIHGTYEDYVSVHLVMELCEGGELFDRIVQKGHYSERQAAKIIRTIVEVVEACHSLGVMHRDLKPENFLFDSVEEDAKLKATDFGLSVFYKPEVLRKHYGPESDVWSAGVILYILLSGVPPFWAETETGIFRQILEGKIDFQSEPWPSISDSAKDLIRKMLEQNPKKRLTAHEVLRHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLRELFKMIDTDNSGNITFDELKDGLRRVGSDLMESEIKDLMDAADIDNSGTISYGEFIAATIHLNKLEREENLLSAFSYFDKDGSGYITIDEIQQACKEFGLNDFPIDEIIKEIDQDNDGQIDYGEFAAMMRKGNGGGVGRRTMRKTLNFRDAFGLIGNGSNDSQL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2573 483 ProSitePatterns EF-hand calcium-binding domain. 362 374 IPR018247 -
Prci4g2573 483 FunFam Calcium-dependent protein kinase SK5 383 479 - -
Prci4g2573 483 FunFam calcium-dependent protein kinase SK5 307 379 - -
Prci4g2573 483 Pfam Protein kinase domain 28 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2573 483 SUPERFAMILY Protein kinase-like (PK-like) 12 289 IPR011009 -
Prci4g2573 483 ProSiteProfiles EF-hand calcium-binding domain profile. 313 348 IPR002048 GO:0005509
Prci4g2573 483 ProSitePatterns EF-hand calcium-binding domain. 398 410 IPR018247 -
Prci4g2573 483 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 444 - -
Prci4g2573 483 CDD EFh 390 449 IPR002048 GO:0005509
Prci4g2573 483 SMART serkin_6 28 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2573 483 ProSiteProfiles EF-hand calcium-binding domain profile. 385 420 IPR002048 GO:0005509
Prci4g2573 483 SUPERFAMILY EF-hand 309 449 IPR011992 -
Prci4g2573 483 ProSiteProfiles EF-hand calcium-binding domain profile. 349 384 IPR002048 GO:0005509
Prci4g2573 483 Pfam EF-hand domain pair 388 449 IPR002048 GO:0005509
Prci4g2573 483 Pfam EF-hand domain pair 318 378 IPR002048 GO:0005509
Prci4g2573 483 ProSitePatterns Protein kinases ATP-binding region signature. 34 67 IPR017441 GO:0005524
Prci4g2573 483 ProSiteProfiles EF-hand calcium-binding domain profile. 424 454 IPR002048 GO:0005509
Prci4g2573 483 Gene3D - 383 481 - -
Prci4g2573 483 Gene3D Transferase(Phosphotransferase) domain 1 67 268 - -
Prci4g2573 483 Gene3D - 269 379 - -
Prci4g2573 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Prci4g2573 483 FunFam Calcium-dependent protein kinase 5 114 278 - -
Prci4g2573 483 ProSitePatterns EF-hand calcium-binding domain. 432 444 IPR018247 -
Prci4g2573 483 CDD STKc_CAMK 28 269 - -
Prci4g2573 483 SMART efh_1 423 451 IPR002048 GO:0005509
Prci4g2573 483 SMART efh_1 317 345 IPR002048 GO:0005509
Prci4g2573 483 SMART efh_1 353 381 IPR002048 GO:0005509
Prci4g2573 483 SMART efh_1 389 417 IPR002048 GO:0005509
Prci4g2573 483 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Prci4g2573 483 ProSiteProfiles Protein kinase domain profile. 28 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2573 483 CDD EFh 318 377 IPR002048 GO:0005509
Prci4g2573 483 Gene3D Phosphorylase Kinase; domain 1 32 108 - -
Prci4g2573 483 FunFam Calcium-dependent protein kinase 1 30 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2573 Prci-Chr4 38064272 38069073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2573 10 480 EF-hand Containing Proteins AT1G35670 75.560 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci4g2573 Pkinase 1.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2573 K13412 - qsa:O6P43_030287 849.351