Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2561 ATGGGCAGATCTCCTTGCTGCGAGAAGCAGCACACTAACAAAGGCGCTTGGACCAAAGACGAAGACCAACGCCTCATTAACTACATCACTCTTCATGGCCAAGGCTCTTGGCGCTCCCTTCCCAAAGCCGCCGGGTTGCTCAGATGCGGGAAAAGTTGCAGGCTCAGATGGATTAATTACCTCAGACCTGATCTCAAGAGAGGCAATTTCACTCCTGAGGAAGACAACCTTATCATTAGCCTTCACAGCTTACTCGGCAACAAGTGGTCTCTCATTGCAGCAAGGTTACCGGGTCGAACCGATAACGAGATCAAGAACTACTGGAACACCCATATCAAGCGCAAACTCTACAGCCTCGGAATCGACCCTCAAACTCACCGTCCACTCAACGCAGCCGCCGCAGCAAACACAACGGAGATCACCGGTAAGAAGAGAAGTAGCGGCAACCACCAAAATAACCCAAAACTTGAGCTAGTCTCGTCAGGCGAAGATTCAAGCAGCAACAGTAGCAGCGGGATTACCACAGAGGAATCAGCAGACAATTCTGATCATCATCAACAACAACTCAACTTGGAGCTCTCAATAGGTCTTCCTTCTTCCTCTGACGACACTAAAACCATCGTCGTTCACCCCTCAGGAAGCTTAAAACGACAACGACGAGAGGAAGTGCAGGTTGCGTTGCGGTGGTATGGGAACGATAATGAAAGTGGTGAACAAGTTTGTTTGTGTTGCAGTTTAGGTTTTCAGAGTGTTGGTGGTAATCAAGCATGTAGGTGCAAAGCCATGAAGAGTAGTACTTCTTCTTCAGTAATTACTGCACCTACTTCAACTGCTCGGCATCAGACAATAACGTTTACAGATTTTTCACACCCATGA 876 0.4806 MGRSPCCEKQHTNKGAWTKDEDQRLINYITLHGQGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTPEEDNLIISLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSLGIDPQTHRPLNAAAAANTTEITGKKRSSGNHQNNPKLELVSSGEDSSSNSSSGITTEESADNSDHHQQQLNLELSIGLPSSSDDTKTIVVHPSGSLKRQRREEVQVALRWYGNDNESGEQVCLCCSLGFQSVGGNQACRCKAMKSSTSSSVITAPTSTARHQTITFTDFSHP 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2561 291 CDD SANT 69 112 IPR001005 -
Prci4g2561 291 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci4g2561 291 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Prci4g2561 291 MobiDBLite consensus disorder prediction 140 187 - -
Prci4g2561 291 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Prci4g2561 291 CDD SANT 16 61 IPR001005 -
Prci4g2561 291 MobiDBLite consensus disorder prediction 140 177 - -
Prci4g2561 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci4g2561 291 FunFam Myb-related protein 308 69 116 - -
Prci4g2561 291 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci4g2561 291 SMART sant 13 63 IPR001005 -
Prci4g2561 291 SMART sant 66 114 IPR001005 -
Prci4g2561 291 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci4g2561 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci4g2561 291 Gene3D - 14 66 - -
Prci4g2561 291 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 191 - -
Prci4g2561 291 FunFam MYB-related transcription factor 13 66 - -
Prci4g2561 291 Gene3D - 69 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2561 Prci-Chr4 37976706 37978144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2561 1 201 MYB Transcription Factor Family AT4G09460 62.736 5.65e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci4g2561 Myb_DNA-binding 7.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2561 K09422 - gmx:778033 319.316