Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2557 ATGGACAAGTACGAGACCGTGAAGGATTTGGGGGCTGGCAACTTTGGGGTGGCCAGGCTCATGAGGAACAAGGAAACCAAGGAACTCGTCGCCATGAAATACATCGAGCGTGGCCACAAGATTGACGAGAATGTCGCAAGAGAGATTATAAACCACAGGTCCCTGCGACACCCCAATATAATCCGCTTTAAGGAGGTGGTTTTGACCCCCACCCATTTGGCTATAGTGATGGAGTATGCAGCTGGAGGGGAGCTCTTTGAAAGGATCTGTACTGCTGGCAGGTTCAGTGAAGATGAGGCTAGATATTTCTTTCAGCAGCTGATCTCTGGTGTGAGTTTCTGTCATGCCATGCAAATATGCCACAGAGATTTGAAGCTGGAAAATACTCTTCTAGATGGAAGCCCTGCACCTCGCTTGAAGATTTGTGACTTTGGTTATTCCAAGTCATCTTTGCTGCATTCACGACCCAAATCAACTGTTGGAACTCCTGCTTATATAGCACCTGAAGTCCTTTCCAGGAGGGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGGGTGACTCTCTATGTCATGTTGGTTGGAGCATATCCATTTGAGGACCATGCAGACCCCAGGAATTTCAGAAAAACAATTCAGCGCATAATGGCTGTCCAATACAAAATCCCTGATTACGTCCACATATCTCAAGATTGCAGACACCTCCTTTCTCGTATATTTGTTGCAAATCCATTGAAGAGAATAACTCTCATGGAGATCAAGAACCACCCATGGTTTTTAAAGAACCTTCCAAGGGAGCTGACTGAATCGGCTCAAGCTATCTATTATCAGAGAGACAATCCAAGCTTTTCTGTTCAAAGTGTGGAGGGGATAATGAAAATTGTGGGAGAAGCTAGAAACCCACCTCCAGTGTCTAGACCTATTAAAGGTTTTGGCTGGGAAGGTGAAGAAGGTGAAGGAGATGATGAGGAAGCTGAGGTGGAGGAAGAGGAGGATGAAGAAGATGAATATGACAAAAGGGTCAAAGAGGCTCATGCCAGTGGAGAATTTCAAGTCAGTTAA 1065 0.4554 MDKYETVKDLGAGNFGVARLMRNKETKELVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICTAGRFSEDEARYFFQQLISGVSFCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDHADPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLKRITLMEIKNHPWFLKNLPRELTESAQAIYYQRDNPSFSVQSVEGIMKIVGEARNPPPVSRPIKGFGWEGEEGEGDDEEAEVEEEEDEEDEYDKRVKEAHASGEFQVS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2557 354 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2557 354 Coils Coil 321 348 - -
Prci4g2557 354 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Prci4g2557 354 SUPERFAMILY Protein kinase-like (PK-like) 2 290 IPR011009 -
Prci4g2557 354 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Prci4g2557 354 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2557 354 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Prci4g2557 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Prci4g2557 354 PANTHER SERINE/THREONINE KINASE 3 301 - -
Prci4g2557 354 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2557 354 CDD STKc_SnRK2 3 259 - -
Prci4g2557 354 MobiDBLite consensus disorder prediction 317 338 - -
Prci4g2557 354 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Prci4g2557 354 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Prci4g2557 354 MobiDBLite consensus disorder prediction 306 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2557 Prci-Chr4 37929101 37932799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2557 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 41.912 1.73e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Prci4g2557 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2557 K14498 - gmx:547968 639.032