Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2530 ATGTTTGTCATAATGTTTGTGAGCAGGAAGTTTCCAGCTGAAATTTTCTTGGATATCAAAGAGCCTGACAACATGCTTCGCCCAAAATTTATTGGAGACACTCTAAAATTAATGACAAGGTTACTGCTATTGCTCAGTGTCTTGAGACTCAGTTCTGCAATCACAGATCCTGATGTGGAAGGCGAAGCTTTGGTTGAAGTTAGGAAGGCTCTCCACGATCCCAACCATCAACTAACAGATTGGAATTATTTTTTTGTGTCTGCTTGCGTTAGTTGGTCCCATGTCACTTGTAGAAACGGACACGTCATAGGCCTGAGCCTGGCTTCTTATGGACTTTCTGGAGCAATATCTCCTTCAATCACCAGATTGAAATATTTGACTAGCTTGGAGTTGAAGAACAACAAGTTCTCAGGCCCCTTACCTGATTATATTGCCAATCTGACACAGATACAATATCTAAACCTTGGAGATAATCATTTTAGTGGTTCTATTCCAGCTAGCTGGGGCAAGCTTCGAAATCTAAGGAATCTGATCTTGAGAGGGAATGACTTATCCGGACCTGTACCAGACACTCTTGCTAATATTAGTGGGTTGGCAGAATTGGATCTTTCATCTAATGTTCTAACTGGAGATATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACACCCCTTCATTGCGGATCACACTTGGAGAGGCCTTGTGTTTCTAATTCTGCCATCCCAGCTTGTACCAACAAATCAATAGTTGCAGCGGTTGTGAGTTTTGCAAGTTGTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATCTTTGCACATAGATACCTATACGTACGAAGATACGCAAATGAAATCTTTTTTGATGTTTCAGGTGAAGATGAAAGAAACATTTCCTTGGGGCAACTGAGAAGATTTTCTTTCCGAGAGTTACAACTCGCCACTAAGAATTTCTGCGAGAACAATGTGATAGGCCAAGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTCTTAGATAACACTAAAGTCGCTATCAAACGTCTGGTTGATTATAATAACCCTGGTGGAGAGGCTGCATTCCAAAGAGAAGTTCAACTAATAAGTGTTGCAGTTCACAGGAATCTCCTTCGCTTAATCGGATTCTGCACAACCCCTACCGAAAGAATCCTTGTATACCCTTTCATGGAAAATCTAAGCGTAGCGCATCGCTTGAGAGATTTGAAACCTGGTGAGAAAGGCTTAGACTGGCCAACAAGGAAGCGCGTGGCCTTTGGTACAGCACATGGCTTGGAGTACCTCCATGAGCAATGTATTCCCAAGGTTATACACCGAGATCTGAAAGCTGCAAACATCTTATTAGACGATGACTTTGAAGCTGTACTTGGAGATTTTGGTTTGACTAAGCTTGTTGATACAAGGCTGACACATGTCACCACTCAGGTGAGAGGCACGATGGGTCATATTGCCCCAGAATACCTGTCCACAGGAAAATCATCAGAGAAGACTGATGTCTTTGGATATGGCATCACACTTCTTGAACTTGTCACCGGTCAGCGTGCGATAGACCTGTCTCGGCTTGAAGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAGAAGTTACTGAGAGAGAACAGGCTAGAGAATATAGTGGATAGGAATCTGGAGAGTTACGATCCAAAAGAAGTAGAAAGAATAGTTCAAGTAGCATTGCTTTGCACACAAGGGATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAATATGCTTCAGGGTGTGGGTTTGGCAGAGAGATGGGCTGAGTGGGAGCAATTGGAAGAGATCAGTAATCAGGAATTCTCATCACTTTCTCATCACTTTGCTTGGGCTGATGAATCCACTCATCAAGAGGCTATACAGCTTTCCACGGCGAGATAA 1929 0.4298 MFVIMFVSRKFPAEIFLDIKEPDNMLRPKFIGDTLKLMTRLLLLLSVLRLSSAITDPDVEGEALVEVRKALHDPNHQLTDWNYFFVSACVSWSHVTCRNGHVIGLSLASYGLSGAISPSITRLKYLTSLELKNNKFSGPLPDYIANLTQIQYLNLGDNHFSGSIPASWGKLRNLRNLILRGNDLSGPVPDTLANISGLAELDLSSNVLTGDIPMQLFSVPSFNFSNTPLHCGSHLERPCVSNSAIPACTNKSIVAAVVSFASCGALALLCLGAIFAHRYLYVRRYANEIFFDVSGEDERNISLGQLRRFSFRELQLATKNFCENNVIGQGGFGKVYKGVLLDNTKVAIKRLVDYNNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTPTERILVYPFMENLSVAHRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCIPKVIHRDLKAANILLDDDFEAVLGDFGLTKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLENIVDRNLESYDPKEVERIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWEQLEEISNQEFSSLSHHFAWADESTHQEAIQLSTAR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2530 642 Pfam Protein kinase domain 324 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2530 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Prci4g2530 642 SUPERFAMILY L domain-like 61 229 - -
Prci4g2530 642 FunFam Somatic embryogenesis receptor-like kinase 1 398 614 - -
Prci4g2530 642 ProSiteProfiles Protein kinase domain profile. 321 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2530 642 Gene3D Transferase(Phosphotransferase) domain 1 398 614 - -
Prci4g2530 642 Gene3D Ribonuclease Inhibitor 57 241 IPR032675 -
Prci4g2530 642 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 42 605 - -
Prci4g2530 642 Gene3D Phosphorylase Kinase; domain 1 290 397 - -
Prci4g2530 642 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Prci4g2530 642 FunFam Leucine-rich repeat receptor-like protein kinase 57 214 - -
Prci4g2530 642 FunFam Somatic embryogenesis receptor kinase 1 290 397 - -
Prci4g2530 642 Pfam Leucine rich repeat N-terminal domain 59 97 IPR013210 -
Prci4g2530 642 SMART serkin_6 321 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2530 642 SUPERFAMILY Protein kinase-like (PK-like) 300 594 IPR011009 -
Prci4g2530 642 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2530 Prci-Chr4 37660546 37664525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2530 34 642 Receptor kinase-like Gene Family AT5G10290 55.719 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci4g2530 Pkinase 9.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2530 - - pcin:129307818 1213.36