Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2529 ATGCTTCGCCCAAAATTTATTGGAGACACTCTAAAATTAATGACAAGGTTACTGCTATTGCTCAGTGTCTTGAGACTCAGTTCTGCAATCACAGATCCTGATGTGGAAGGCGAAGCTTTGGTTGAAGTTAGGAAGGCTCTCCACGATCCCAACCATCAACTAACAGATTGGAATTATTTTTTTGTGTCTGCTTGCGTTAGTTGGTCCCATGTCACTTGTAGAAACGGACACGTCATAGGCCTGAGCCTGGCTTCTTATGGACTTTCTGGAGCAATATCTCCTTCAATCACCAGATTGAAATATTTGACTAGCTTGGAGTTGAAGAACAACAAGTTCTCAGGCCCCTTACCTGATTATATTGCCAATCTGACACAGATACAATATCTAAACCTTGGAGATAATCATTTTAGTGGTTCTATTCCAGCTAGCTGGGGCAAGCTTCGAAATCTAAGGAATCTGATCTTGAGAGGGAATGACTTATCCGGACCTGTACCAGACACTCTTGCTAATATTAGTGGGTTGGCAGAATTGGATCTTTCATCTAATGTTCTAACTGGAGATATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACACCCCTTCATTGCGGATCACACTTGGAGAGGCCTTGTGTTTCTAATTCTGCCATCCCAGCTTGTACCAACAAATCAATAGTTGCAGCGGTTGTGAGTTTTGCAAGTTGTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATCTTTGCACATAGATACCTATACGTACGAAGATACGCAAATGAAATCTTTTTTGATGTTTCAGGTGAAGATGAAAGAAACATTTCCTTGGGGCAACTGAGAAGATTTTCTTTCCGAGAGTTACAACTCGCCACTAAGAATTTCTGCGAGAACAATGTGATAGGCCAAGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTCTTAGATAACACTAAAGTCGCTATCAAACGTCTGGTTGATTATAATAACCCTGGTGGAGAGGCTGCATTCCAAAGAGAAGTTCAACTAATAAGTGTTGCAGTTCACAGGAATCTCCTTCGCTTAATCGGATTCTGCACAACCCCTACCGAAAGAATCCTTGTATACCCTTTCATGGAAAATCTAAGCGTAGCGCATCGCTTGAGAGATTTGAAACCTGGTGAGAAAGGCTTAGACTGGCCAACAAGGAAGCGCGTGGCCTTTGGTACAGCACATGGCTTGGAGTACCTCCATGAGCAATGTATTCCCAAGGTTATACACCGAGATCTGAAAGCTGCAAACATCTTATTAGACGATGACTTTGAAGCTGTACTTGGAGATTTTGGTTTGACTAAGCTTGTTGATACAAGGCTGACACATGTCACCACTCAGGTGAGAGGCACGATGGGTCATATTGCCCCAGAATACCTGTCCACAGGAAAATCATCAGAGAAGACTGATGTCTTTGGATATGGCATCACACTTCTTGAACTTGTCACCGGTCAGCGTGCGATAGACCTGTCTCGGCTTGAAGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAGAAGTTACTGAGAGAGAACAGGCTAGAGAATATAGTGGATAGGAATCTGGAGAGTTACGATCCAAAAGAAGTAGAAAGAATAGTTCAAGTAGCATTGCTTTGCACACAAGGGATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAATATGCTTCAGGGTGTGGGTTTGGCAGAGAGATGGGCTGAGTGGGAGCAATTGGAAGAGATCAGTAATCAGGAATTCTCATCACTTTCTCATCACTTTGCTTGGGCTGATGAATCCACTCATCAAGAGGCTATACAGCTTTCCACGGCGAGATAA 1857 0.4319 MLRPKFIGDTLKLMTRLLLLLSVLRLSSAITDPDVEGEALVEVRKALHDPNHQLTDWNYFFVSACVSWSHVTCRNGHVIGLSLASYGLSGAISPSITRLKYLTSLELKNNKFSGPLPDYIANLTQIQYLNLGDNHFSGSIPASWGKLRNLRNLILRGNDLSGPVPDTLANISGLAELDLSSNVLTGDIPMQLFSVPSFNFSNTPLHCGSHLERPCVSNSAIPACTNKSIVAAVVSFASCGALALLCLGAIFAHRYLYVRRYANEIFFDVSGEDERNISLGQLRRFSFRELQLATKNFCENNVIGQGGFGKVYKGVLLDNTKVAIKRLVDYNNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTPTERILVYPFMENLSVAHRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCIPKVIHRDLKAANILLDDDFEAVLGDFGLTKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLENIVDRNLESYDPKEVERIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWEQLEEISNQEFSSLSHHFAWADESTHQEAIQLSTAR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2529 618 Pfam Protein kinase domain 300 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2529 618 ProSiteProfiles Protein kinase domain profile. 297 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2529 618 Gene3D Phosphorylase Kinase; domain 1 266 373 - -
Prci4g2529 618 SUPERFAMILY Protein kinase-like (PK-like) 276 570 IPR011009 -
Prci4g2529 618 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Prci4g2529 618 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Prci4g2529 618 FunFam Somatic embryogenesis receptor kinase 1 266 373 - -
Prci4g2529 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 18 581 - -
Prci4g2529 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Prci4g2529 618 SUPERFAMILY L domain-like 37 205 - -
Prci4g2529 618 SMART serkin_6 297 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2529 618 Gene3D Transferase(Phosphotransferase) domain 1 374 590 - -
Prci4g2529 618 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
Prci4g2529 618 FunFam Somatic embryogenesis receptor-like kinase 1 374 590 - -
Prci4g2529 618 FunFam Leucine-rich repeat receptor-like protein kinase 33 190 - -
Prci4g2529 618 Gene3D Ribonuclease Inhibitor 33 217 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2529 Prci-Chr4 37660546 37664641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2529 10 618 Receptor kinase-like Gene Family AT5G10290 55.719 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci4g2529 Pkinase 8.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2529 - - pcin:129307818 1180.62