Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2526 ATGGGGGACTCAAGCGCCCAGGCTTCAAGCCTCAGGAAGTTTCCAGCTGAAATTTTCTTGGATATCAAAGAGCCTGACAACATGCTTCGCCCAAAATTTATTGGAGACACTCTAAAATTAATGACAAGGTTACTGCTATTGCTCAGTGTCTTGAGACTCAGTTCTGCAATCACAGATCCTGATGTGGAAGGCGAAGCTTTGGTTGAAGTTAGGAAGGCTCTCCACGATCCCAACCATCAACTAACAGATTGGAATTATTTTTTTGTGTCTGCTTGCGTTAGTTGGTCCCATGTCACTTGTAGAAACGGACACGTCATAGGCCTGAGCCTGGCTTCTTATGGACTTTCTGGAGCAATATCTCCTTCAATCACCAGATTGAAATATTTGACTAGCTTGGAGTTGAAGAACAACAAGTTCTCAGGCCCCTTACCTGATTATATTGCCAATCTGACACAGATACAATATCTAAACCTTGGAGATAATCATTTTAGTGGTTCTATTCCAGCTAGCTGGGGCAAGCTTCGAAATCTAAGGAATCTGATCTTGAGAGGGAATGACTTATCCGGACCTGTACCAGACACTCTTGCTAATATTAGTGGGTTGGCAGAATTGGATCTTTCATCTAATGTTCTAACTGGAGATATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACACCCCTTCATTGCGGATCACACTTGGAGAGGCCTTGTGTTTCTAATTCTGCCATCCCAGCTTGTACCAACAAATCAATAGTTGCAGCGGTTGTGAGTTTTGCAAGTTGTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATCTTTGCACATAGATACCTATACGTACGAAGATACGCAAATGAAATCTTTTTTGATGTTTCAGGTGAAGATGAAAGAAACATTTCCTTGGGGCAACTGAGAAGATTTTCTTTCCGAGAGTTACAACTCGCCACTAAGAATTTCTGCGAGAACAATGTGATAGGCCAAGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTCTTAGATAACACTAAAGTCGCTATCAAACGTCTGGTTGATTATAATAACCCTGGTGGAGAGGCTGCATTCCAAAGAGAAGTTCAACTAATAAGTGTTGCAGTTCACAGGAATCTCCTTCGCTTAATCGGATTCTGCACAACCCCTACCGAAAGAATCCTTGTATACCCTTTCATGGAAAATCTAAGCGTAGCGCATCGCTTGAGAGATTTGAAACCTGGTGAGAAAGGCTTAGACTGGCCAACAAGGAAGCGCGTGGCCTTTGGTACAGCACATGGCTTGGAGTACCTCCATGAGCAATGTATTCCCAAGGTTATACACCGAGATCTGAAAGCTGCAAACATCTTATTAGACGATGACTTTGAAGCTGTACTTGGAGATTTTGGTTTGACTAAGCTTGTTGATACAAGGCTGACACATGTCACCACTCAGGTGAGAGGCACGATGGGTCATATTGCCCCAGAATACCTGTCCACAGGAAAATCATCAGAGAAGACTGATGTCTTTGGATATGGCATCACACTTCTTGAACTTGTCACCGGTCAGCGTGCGATAGACCTGTCTCGGCTTGAAGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAGAAGTTACTGAGAGAGAACAGGCTAGAGAATATAGTGGATAGGAATCTGGAGAGTTACGATCCAAAAGAAGTAGAAAGAATAGTTCAAGTAGCATTGCTTTGCACACAAGGGATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAATATGCTTCAGGGTGTGGGTTTGGCAGAGAGATGGGCTGAGTGGGAGCAATTGGAAGAGATCAGTAATCAGGAATTCTCATCACTTTCTCATCACTTTGCTTGGGCTGATGAATCCACTCATCAAGAGGCTATACAGCTTTCCACGGCGAGATAA 1938 0.4345 MGDSSAQASSLRKFPAEIFLDIKEPDNMLRPKFIGDTLKLMTRLLLLLSVLRLSSAITDPDVEGEALVEVRKALHDPNHQLTDWNYFFVSACVSWSHVTCRNGHVIGLSLASYGLSGAISPSITRLKYLTSLELKNNKFSGPLPDYIANLTQIQYLNLGDNHFSGSIPASWGKLRNLRNLILRGNDLSGPVPDTLANISGLAELDLSSNVLTGDIPMQLFSVPSFNFSNTPLHCGSHLERPCVSNSAIPACTNKSIVAAVVSFASCGALALLCLGAIFAHRYLYVRRYANEIFFDVSGEDERNISLGQLRRFSFRELQLATKNFCENNVIGQGGFGKVYKGVLLDNTKVAIKRLVDYNNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTPTERILVYPFMENLSVAHRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCIPKVIHRDLKAANILLDDDFEAVLGDFGLTKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLENIVDRNLESYDPKEVERIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWEQLEEISNQEFSSLSHHFAWADESTHQEAIQLSTAR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2526 645 Gene3D Ribonuclease Inhibitor 60 244 IPR032675 -
Prci4g2526 645 FunFam Somatic embryogenesis receptor-like kinase 1 401 617 - -
Prci4g2526 645 SMART serkin_6 324 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2526 645 SUPERFAMILY Protein kinase-like (PK-like) 303 597 IPR011009 -
Prci4g2526 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Prci4g2526 645 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Prci4g2526 645 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 45 608 - -
Prci4g2526 645 FunFam Leucine-rich repeat receptor-like protein kinase 60 217 - -
Prci4g2526 645 ProSiteProfiles Protein kinase domain profile. 324 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2526 645 Pfam Leucine rich repeat N-terminal domain 62 100 IPR013210 -
Prci4g2526 645 FunFam Somatic embryogenesis receptor kinase 1 293 400 - -
Prci4g2526 645 Gene3D Phosphorylase Kinase; domain 1 293 400 - -
Prci4g2526 645 SUPERFAMILY L domain-like 64 231 - -
Prci4g2526 645 Pfam Protein kinase domain 327 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2526 645 Gene3D Transferase(Phosphotransferase) domain 1 401 617 - -
Prci4g2526 645 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2526 Prci-Chr4 37660546 37664727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2526 37 645 Receptor kinase-like Gene Family AT5G10290 55.719 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci4g2526 Pkinase 9.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2526 - - pcin:129307818 1232.62