Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2524 ATGGGGGACTCAAGCGCCCAGGCTTCAAGCCTGAAGTTTCCAGCTGAAATTTTCTTGGATATCAAAGAGCCTGACAACATGCTTCGCCCAAAATTTATTGGAGACACTCTAAAATTAATGACAAGGTTACTGCTATTGCTCAGTGTCTTGAGACTCAGTTCTGCAATCACAGATCCTGATGTGGAAGGCGAAGCTTTGGTTGAAGTTAGGAAGGCTCTCCACGATCCCAACCATCAACTAACAGATTGGAATTATTTTTTTGTGTCTGCTTGCGTTAGTTGGTCCCATGTCACTTGTAGAAACGGACACGTCATAGGCCTGAGCCTGGCTTCTTATGGACTTTCTGGAGCAATATCTCCTTCAATCACCAGATTGAAATATTTGACTAGCTTGGAGTTGAAGAACAACAAGTTCTCAGGCCCCTTACCTGATTATATTGCCAATCTGACACAGATACAATATCTAAACCTTGGAGATAATCATTTTAGTGGTTCTATTCCAGCTAGCTGGGGCAAGCTTCGAAATCTAAGGAATCTGATCTTGAGAGGGAATGACTTATCCGGACCTGTACCAGACACTCTTGCTAATATTAGTGGGTTGGCAGAATTGGATCTTTCATCTAATGTTCTAACTGGAGATATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACACCCCTTCATTGCGGATCACACTTGGAGAGGCCTTGTGTTTCTAATTCTGCCATCCCAGCTTGTACCAACAAATCAATAGTTGCAGCGGTTGTGAGTTTTGCAAGTTGTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATCTTTGCACATAGATACCTATACGTACGAAGATACGCAAATGAAATCTTTTTTGATGTTTCAGGTGAAGATGAAAGAAACATTTCCTTGGGGCAACTGAGAAGATTTTCTTTCCGAGAGTTACAACTCGCCACTAAGAATTTCTGCGAGAACAATGTGATAGGCCAAGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTCTTAGATAACACTAAAGTCGCTATCAAACGTCTGGTTGATTATAATAACCCTGGTGGAGAGGCTGCATTCCAAAGAGAAGTTCAACTAATAAGTGTTGCAGTTCACAGGAATCTCCTTCGCTTAATCGGATTCTGCACAACCCCTACCGAAAGAATCCTTGTATACCCTTTCATGGAAAATCTAAGCGTAGCGCATCGCTTGAGAGATTTGAAACCTGGTGAGAAAGGCTTAGACTGGCCAACAAGGAAGCGCGTGGCCTTTGGTACAGCACATGGCTTGGAGTACCTCCATGAGCAATGTATTCCCAAGGTTATACACCGAGATCTGAAAGCTGCAAACATCTTATTAGACGATGACTTTGAAGCTGTACTTGGAGATTTTGGTTTGACTAAGCTTGTTGATACAAGGCTGACACATGTCACCACTCAGGTGAGAGGCACGATGGGTCATATTGCCCCAGAATACCTGTCCACAGGAAAATCATCAGAGAAGACTGATGTCTTTGGATATGGCATCACACTTCTTGAACTTGTCACCGGTCAGCGTGCGATAGACCTGTCTCGGCTTGAAGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAGAAGTTACTGAGAGAGAACAGGCTAGAGAATATAGTGGATAGGAATCTGGAGAGTTACGATCCAAAAGAAGTAGAAAGAATAGTTCAAGTAGCATTGCTTTGCACACAAGGGATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAATATGCTTCAGGGTGTGGGTTTGGCAGAGAGATGGGCTGAGTGGGAGCAATTGGAAGAGATCAGTAATCAGGAATTCTCATCACTTTCTCATCACTTTGCTTGGGCTGATGAATCCACTCATCAAGAGGCTATACAGCTTTCCACGGCGAGATAA 1935 0.4341 MGDSSAQASSLKFPAEIFLDIKEPDNMLRPKFIGDTLKLMTRLLLLLSVLRLSSAITDPDVEGEALVEVRKALHDPNHQLTDWNYFFVSACVSWSHVTCRNGHVIGLSLASYGLSGAISPSITRLKYLTSLELKNNKFSGPLPDYIANLTQIQYLNLGDNHFSGSIPASWGKLRNLRNLILRGNDLSGPVPDTLANISGLAELDLSSNVLTGDIPMQLFSVPSFNFSNTPLHCGSHLERPCVSNSAIPACTNKSIVAAVVSFASCGALALLCLGAIFAHRYLYVRRYANEIFFDVSGEDERNISLGQLRRFSFRELQLATKNFCENNVIGQGGFGKVYKGVLLDNTKVAIKRLVDYNNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTPTERILVYPFMENLSVAHRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCIPKVIHRDLKAANILLDDDFEAVLGDFGLTKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLENIVDRNLESYDPKEVERIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWEQLEEISNQEFSSLSHHFAWADESTHQEAIQLSTAR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2524 644 Gene3D Phosphorylase Kinase; domain 1 292 399 - -
Prci4g2524 644 FunFam Somatic embryogenesis receptor kinase 1 292 399 - -
Prci4g2524 644 Pfam Leucine rich repeat N-terminal domain 61 99 IPR013210 -
Prci4g2524 644 ProSiteProfiles Protein kinase domain profile. 323 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2524 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Prci4g2524 644 Gene3D Ribonuclease Inhibitor 59 243 IPR032675 -
Prci4g2524 644 SUPERFAMILY L domain-like 63 231 - -
Prci4g2524 644 Gene3D Transferase(Phosphotransferase) domain 1 400 616 - -
Prci4g2524 644 SMART serkin_6 323 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2524 644 Pfam Protein kinase domain 326 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g2524 644 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 44 607 - -
Prci4g2524 644 FunFam Somatic embryogenesis receptor-like kinase 1 400 616 - -
Prci4g2524 644 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Prci4g2524 644 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Prci4g2524 644 FunFam Leucine-rich repeat receptor-like protein kinase 59 216 - -
Prci4g2524 644 SUPERFAMILY Protein kinase-like (PK-like) 302 596 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2524 Prci-Chr4 37660546 37664808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2524 36 644 Receptor kinase-like Gene Family AT5G10290 55.719 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci4g2524 Pkinase 9.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2524 - - pcin:129307818 1226.08