Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2453 ATGAATGGTGAATTGGAGTTACCACCTGGATTCAGATTCCACCCAACGGACGAGGAGCTGGTGAATCACTATCTGTGTACCAAATGTGCCTCTCACTCCATTGCTGTTCCCATTATCAAAGAGATCGATCTCTACAAATTTGATCCATGGCAGCTTCCTGAAATGGCACTGTACGGTGAGAAAGAATGGTACTTCTTTTCACCGAGGGACCGGAAATATCCTAACGGTTCGAGGCCGAACCGGGCTGCTGGAAGTGGGTATTGGAAAGCGACCGGAGCCGACAAGCCGATTGGTAAGCCGAAGGCACTGGGAATAAAGAAGGCACTCGTATTCTACGCGGGTAAAGCCCCCAATGGCATCAAAACGAATTGGATCATGCATGAATATCGCCTCGCTAATGTTGACAGATCCGCCGGCAAGAAGAAAAACCTAAGGCTTGATGATTGGGTTTTATGTCGAATTTACAACAAGAAAGGCACGATCGAGAAATACAATGTGGCGGATCAGAAAGCGGGCAAGCTATCAGAGTTCCATGACCATGAGACCAAGCCGGAAATCAAATCGTACGACCACAACAAGGGTCAGGTACCGGCGGCACCGTCGGCGTTAACAAACGACCAGTTCTATATGGACACGTCGGACTCGGGGCCGAGGTTGCACACGGATTCAAGCTGCTCGGAGCACGTGGTTTCGCCGGACGTCACGTGCGACAAGGAGGTACAGAGCGAGGCCAAGTGGAACGAGCTAGGGCTAGGAGAAGATGATGGGTTTGATTTTGAATTGAATTACGGTTATAATAATATGAATATGAATAACCTCTCGGGAGAAGATCCTTTTGCCTCCTCTGTACAGTACCAAATGAACCAGCTCTCGCCATTGCAGGACATGTTCATGTTTCTACAGAAGCCATTTTGA 915 0.4874 MNGELELPPGFRFHPTDEELVNHYLCTKCASHSIAVPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPNGIKTNWIMHEYRLANVDRSAGKKKNLRLDDWVLCRIYNKKGTIEKYNVADQKAGKLSEFHDHETKPEIKSYDHNKGQVPAAPSALTNDQFYMDTSDSGPRLHTDSSCSEHVVSPDVTCDKEVQSEAKWNELGLGEDDGFDFELNYGYNNMNMNNLSGEDPFASSVQYQMNQLSPLQDMFMFLQKPF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2453 304 FunFam NAC transcription factor 16 161 - -
Prci4g2453 304 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Prci4g2453 304 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 219 - -
Prci4g2453 304 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Prci4g2453 304 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Prci4g2453 304 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2453 Prci-Chr4 37343139 37344851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2453 1 304 NAC Transcription Factor Family AT1G01720 62.136 1.05e-124 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci4g2453 NAM 5.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2453 - - gmx:100170751 468.774