Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2439 ATGCATAAACAATTTATCACCCGACCAGTTTTCATCTCTCTTGCGCACAACGCAAAACAGAGATTGCGAAGAAGTTTTAGTGAAGTGTTACTACTGCTTCCAGAGATGTCTGAAAAAGGTAAAAGGAAGGACGACCAGGATCACGCTTCCGACGGTGATTCTGAGGGCCACGCGCCACCCAAAAAGTTCCCGAAGAGGGATTCCGCCGACTCTGATGAAATCGTCGTCTGCGAGATATCTAAGAACAGAAGGGTGAGTGTGAGGAACTGGAATGGCAGGATTTGGGTGGATATTCGGGAATTTTACGTGAAAGATGGGAAGCAATTGCCTGGAAAGAAAGGCATTTCACTGAGCATTGACCAGTGGAAAGTACTTCGGGATCATGTTGATAAAATTGACAATGCTCTGACGGAGGATTCCTAG 423 0.461 MHKQFITRPVFISLAHNAKQRLRRSFSEVLLLLPEMSEKGKRKDDQDHASDGDSEGHAPPKKFPKRDSADSDEIVVCEISKNRRVSVRNWNGRIWVDIREFYVKDGKQLPGKKGISLSIDQWKVLRDHVDKIDNALTEDS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2439 140 Gene3D Transcriptional Coactivator Pc4; Chain A 67 140 IPR009044 GO:0003677|GO:0006355
Prci4g2439 140 MobiDBLite consensus disorder prediction 37 71 - -
Prci4g2439 140 Pfam Transcriptional Coactivator p15 (PC4) 77 128 IPR003173 GO:0003677|GO:0006355
Prci4g2439 140 SUPERFAMILY ssDNA-binding transcriptional regulator domain 76 137 IPR009044 GO:0003677|GO:0006355
Prci4g2439 140 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 42 138 IPR045125 GO:0003713|GO:0060261
Prci4g2439 140 FunFam Putative transcriptional co-activator 67 140 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Prci4g2439 PC4 1.4e-25 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2439 K25815 - cit:102607972 160.999