Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2414 ATGGGAAGTGAAAGGGTGAATCTTCCACCTGGCTTTCTCTTCTCTCCAACAGATGAGGAACTGGTTCTTCACTTTCTTTATCCCAAGGCTTCTCTTCTACCCTGCCATCCCAATATCATCCCTGATCTTGATCTCTCTCTCTCTCAGCCTTTCCAGCTCAACGGGAAGGCGTTGTCAAGTGGAAACCAATTCTATTTCTTCACCAAGTATAAGAAAAAAAGAGCGACAGAAAGTGGGTATTGGAAGAAAATAGGAGTAACTGAGTCAGTAGTCTCAGCTGCTGGAAAGAAAGTTGGGATCAAGAAATATTTAGTATTCAATAATGGAGAAGCTCCTCATGACACTGAAACCAGCTGGGTCATGCAAGAGTACCATCTTTGCTCTTCTGGGTCTCACAATACGTCTCGTATAAACACTAGAGGAACTCCAAAACCAGATGCAAGTGAATGGGTCCTGTGCCGAGTCTATGAAAAGAAGAGAGGCTCTGAAGATGATGATGAAGGTGGAAATACGGAGCTTTCATGGATGGATCAAATGTATATGTCGACGTTGGATGATGAAGAAGAAGAAATTACCTTCCCTAATTAG 588 0.4286 MGSERVNLPPGFLFSPTDEELVLHFLYPKASLLPCHPNIIPDLDLSLSQPFQLNGKALSSGNQFYFFTKYKKKRATESGYWKKIGVTESVVSAAGKKVGIKKYLVFNNGEAPHDTETSWVMQEYHLCSSGSHNTSRINTRGTPKPDASEWVLCRVYEKKRGSEDDDEGGNTELSWMDQMYMSTLDDEEEEITFPN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2414 195 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Prci4g2414 195 PANTHER NAC TRANSCRIPTION FACTOR 56 8 165 - -
Prci4g2414 195 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Prci4g2414 195 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
Prci4g2414 195 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2414 Prci-Chr4 36897500 36898604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2414 5 162 NAC Transcription Factor Family AT3G04070 40.588 7.24e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci4g2414 NAM 2.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2414 - - gmx:100779578 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2414 4 36897500 36898604 Prci4g2414 4 36897500 36898604 ECH