Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2400 ATGAATGTCTCCTATCTTAATCGCTTCTCTGAGCGTCTTGTGGCTCCTCTCTACTCTACAGCTCCCATCAGGAGCCATAGGACGGATGATATTGCTATTGAGGGTCGTAACCTGAATTTCTCGTTCCCCACGAGGCAGGTGAAAGCTGTACCGATTCTTCGGGATTGTTCAATTCGCATTCCTTCTAGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGCGGAAAATCTACCCTCTTAAAGATATTGGCTGGTCTCTTAAATCCTACTTCAGGAACAGTGCACGTGAAAGGGCCTAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACAGTGGAAGCTGACGTTGCATTTGGTCTTGGCAAGTTCAATCTGACCCAAGATGAAGTGAGATCAAGGGTCTCAAGAGCCTTGCATGCCGTGGGCATGTCGGACTACATGCAGAGATCTGTTCAAACTCTAAGCGGTGGTCAGAAGCAGAGGGTAGCCATTGCCGGTGCTCTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACGTTTTTAGATGAAAATGACCAGGTTGGAGTTATCAAAGCGGTTAGGAACTCTCTGGATACCTCTATAGGGGTCACAGCATTGTGGGTCACTCATCGTTTGGAAGAATTGAAGTATGCTGATGGTGCCATCTACTTGGAGGACGGGAAAGTTGTGATGCATGATGATGCTGAAAGAGTAGGAAATTTCATTGAAGCCAGGCAATCCGACTATATCAGACAGATAAATTCTTGA 789 0.4588 MNVSYLNRFSERLVAPLYSTAPIRSHRTDDIAIEGRNLNFSFPTRQVKAVPILRDCSIRIPSRQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVHVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTQDEVRSRVSRALHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDENDQVGVIKAVRNSLDTSIGVTALWVTHRLEELKYADGAIYLEDGKVVMHDDAERVGNFIEARQSDYIRQINS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2400 262 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 258 IPR003439 GO:0005524
Prci4g2400 262 Pfam ABC transporter 53 185 IPR003439 GO:0005524
Prci4g2400 262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 247 IPR027417 -
Prci4g2400 262 ProSitePatterns ABC transporters family signature. 158 172 IPR017871 GO:0005524|GO:0016887
Prci4g2400 262 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 33 245 - -
Prci4g2400 262 SMART AAA_5 62 235 IPR003593 GO:0016887
Prci4g2400 262 CDD ABC_cobalt_CbiO_domain1 34 235 IPR015856 GO:0005524|GO:0016020|GO:0055085
Prci4g2400 262 Gene3D - 28 260 IPR027417 -
Prci4g2400 262 FunFam ABC transporter I family member 10 29 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2400 Prci-Chr4 36805562 36808201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2400 33 236 Calmodulin-binding Proteins AT2G36910 31.532 2.70e-23 97.1