Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2397 ATGGCTACGAGAAAATTGATTCCTGGGTTTCGATTTCATCCTACTGATGTTGAGCTCCTCAGATTCTTTCTGAAGAGGAAGGTTATGGGTAAGAAAATCCCGGGTGGTGTGATCGCAGAAGTAGCAATATACAAGTACGCTCCATGGGATCTCCCAGATAAATCTTATCTTAGAACCGGAGATTTGGAATGGTTCTTCTTTTGCCCCAGAGAAAAGAAATATGCCAGTGGGGCCAGAATGAATCGTGCTACGGAAGTCGGATACTGGAAAACTACTGGGAGGGATAGACCTGTTCATGACAGGGATCGAATTGTGGGAATGATAAAAACCCTGATATTTCACACTGGCAGAGCTCCTCAAGGAGAGAGAACTAATTGGGTCATGCATGAATTTAGGCTCCAAGATGAGGATTTGATTGATAAAGGCATTCCACAGGATTCCTATGTGCTTTGTAAGGTTTTCCAAAAAGATGGTCCTGGTCCAAGGAATGGTGCACAATATGGAAGACCATTCAATGATGAAGACTGGGATGATGACGGAGAAATTGACGGTTTAGGATCTCTCCCATTAGTTAGTGTGCATGCACCAATTACCATTTCTAATACACCTGGCAGTTCTATAGCAACTTACGGTCATCCCCCTGCGAGTGTATGCATTGGATCATCACCAGAGTCATGTCTTATGTATCCTTCAGTTCCAAGTGATCAAGTTATACCCAATGATGGGCCTCAAGTTCCAGCTGATGATGATATTGTTGCAATGTTGGATTGTTTCACAGAGAATGACACAGTAGCTGTGAATGAAAACAACAACGAGGTGCACAGTCTATTTGCAATGTTGGATTGTTTCACAGAGAATGACACAGTGGCTGTGAATGAGAACAACAACGAGGAGAATGGTAACTCTGCTATGGACAAGGATACTGAAGATATTTTCGAGGACTTGGGAGACCTTAACAATACAAACCAAATCTATGGTGCTGGTAGTATGTCCATGGTGTTTGATGATTTCTTGGAGTTGCGGGACCTTGGCACCAATGTCCCGCCAGACTGA 1053 0.434 MATRKLIPGFRFHPTDVELLRFFLKRKVMGKKIPGGVIAEVAIYKYAPWDLPDKSYLRTGDLEWFFFCPREKKYASGARMNRATEVGYWKTTGRDRPVHDRDRIVGMIKTLIFHTGRAPQGERTNWVMHEFRLQDEDLIDKGIPQDSYVLCKVFQKDGPGPRNGAQYGRPFNDEDWDDDGEIDGLGSLPLVSVHAPITISNTPGSSIATYGHPPASVCIGSSPESCLMYPSVPSDQVIPNDGPQVPADDDIVAMLDCFTENDTVAVNENNNEVHSLFAMLDCFTENDTVAVNENNNEENGNSAMDKDTEDIFEDLGDLNNTNQIYGAGSMSMVFDDFLELRDLGTNVPPD 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2397 350 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Prci4g2397 350 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Prci4g2397 350 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Prci4g2397 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 267 - -
Prci4g2397 350 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Prci4g2397 350 FunFam Nac domain-containing protein 86 15 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2397 Prci-Chr4 36757864 36761465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2397 1 273 NAC Transcription Factor Family AT5G09330 48.789 2.28e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci4g2397 NAM 6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2397 - - cit:102616225 327.02