Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2383 ATGACCACTCCTCCCAGGAATCCTCATTCCTCATTCCTTCTCCCAAAATCAACCTTCCTTCTTTTTTCCATGGCTTCTCTTCTTTCTCTCTCCCTTCTCTCCCTCTTCCTCTTCCTTTCTCTCTCCTCCGCCGCTCGCCACCACCGCAAACCCCCCGCCACCTCCCCCTCCTCATCCTCTACCGTTTTCGTCCAGAACGCCTGCAAGGCCACCCGCTTCCCTGAACAATGCCAGTCTTCCCTCAAAAACGTCCCTTCCGACCCCACTCCAGTTCAAATCCTCCAGTCCGCCATGGCTGTGTCCTCGGAGAACCTCAAGACTGCGCAATCCATGGTCAAGTCCATCCTCGACTCATCCGCTTCCAGTATCAACCGCACCACCGCTTGCAAGGTCTGCATCGATGTGCTCCGTTGCTCCGACTACCGCATCGGTCTCGCCAATGACGTGCTGCCGCGTGGCAGGCTCAAGGACGCTCGCGCGTGGATGAGCGCCGCTGCTTACCAGTACGATTGCTGGTCCGCTTTGAAGTACGCCAACGACACTCGCCAGGTCGGTGAGGCGATGGCATTCTTGGACTCCCTCACTAGGATCACCAGTAACTCGTTGAGCATGATGGCGTCGTACGACATCGTTGGAAATGACACCGCGTCGTGGAGGCCACCCTTGACGGAACGTGACGGGTTCTGGGAAGGATCCAGGTCGGGATCCGGATCGTTGGGTTTCAGGGGCGGGTTTCCAGCGAAAGTAAAGCCGGATGTTACGGTGTGTAAGAATGGAGGGAATGGGTGTTACAAGACGGTGCAGGAGGCTGTTAACGCTGCTCCCGATAACGCCGGCGACAAGAAATTTGTGATATACATAAAGGAAGGTGTTTATGAAGAGACTGTTAGGGTTCCGTTGGAGAAGAAGAATGTGGTGTTTTATGGGGACGGAATGGGGAAGACCGTCATCACAGGGTCTGCTCAGGCGGATCAACCCGGAATGACGACCTACCTATCAGCTACTGTTGCTGTTCTTGGTGATGGATTCATGGCCAAGGCTCTGACAATCCAGAACACAGCAGGCCCTGTTGCTCATCAAGCAGTGGCCTTAAGATCAGGCAGCGATTTCTCTGTGTACGAGGAATGCGAATTCATAGGCAATCAGGACACCCTCTATGCTCACTCCCTTCGCCAATTTTACAAATCATGCCGCATCCTGGGCAATGTAGACTTCATCTTTGGGAACTCAGCTTCCATCTTCCAAGATTGCCAGATCCTGGTCCGGCCCCGGCAAGTGAAGCCGGAGAGCGGCGAGAACAATGCCGTGACTGCACATGGCAGAACAGACCCTGCTCAAACCACAGGCTTTGTTTTCCAGAACTGCTTGATAAATGGGACCAAGGAGTACATGGATTTGTACCGTAGCAAGCCTCAGAAGCACAAGAACTTCTTGGGGAGGCCATGGAAGGAGTACTCAAGAACAGTGTTCATTAACTCTTTCTTGGAAGCTCTGATATCACCCACGGGCTGGATGCCATGGGGCGGTGGCTTTGCACTGAAGACGCTATACTATGGAGAATATGCCAACACAGGACCTGGTTCTGATTTGAGTCAGAGAGTACCCTGGAGCAGCAAGGTCCCACCAGAGCACGTGTCTGCTTATTCAGTTCAGAATTTCATCCAAGGAGATGAGTGGATTGCATCATCTCTGATTAGCTCGTTAGATTTGTCATAG 1716 0.5309 MTTPPRNPHSSFLLPKSTFLLFSMASLLSLSLLSLFLFLSLSSAARHHRKPPATSPSSSSTVFVQNACKATRFPEQCQSSLKNVPSDPTPVQILQSAMAVSSENLKTAQSMVKSILDSSASSINRTTACKVCIDVLRCSDYRIGLANDVLPRGRLKDARAWMSAAXAYQYDCWSALKYANDTRQVGEAMAFLDSLTRITSNSLSMMASYDIVGNDTASWRPPLTERDGFWEGSRSGSGSLGFRGGFPAKVKPDVTVCKNGGNGCYKTVQEAVNAAPDNAGDKKFVIYIKEGVYEETVRVPLEKKNVVFYGDGMGKTVITGSAQADQPGMTTYLSATVAVLGDGFMAKALTIQNTAGPVAHQAVALRSGSDFSVYEECEFIGNQDTLYAHSLRQFYKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPESGENNAVTAHGRTDPAQTTGFVFQNCLINGTKEYMDLYRSKPQKHKNFLGRPWKEYSRTVFINSFLEALISPTGWMPWGGGFALKTLYYGEYANTGPGSDLSQRVPWSSKVPPEHVSAYSVQNFIQGDEWIASSLISSLDLS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2383 572 Pfam Plant invertase/pectin methylesterase inhibitor 63 205 IPR006501 GO:0004857
Prci4g2383 572 SUPERFAMILY Pectin lyase-like 250 564 IPR011050 -
Prci4g2383 572 Pfam Pectinesterase 253 558 IPR000070 GO:0030599|GO:0042545
Prci4g2383 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 206 IPR035513 -
Prci4g2383 572 CDD PMEI-like_3 67 210 - -
Prci4g2383 572 PANTHER PECTINESTERASE 41 562 - -
Prci4g2383 572 NCBIfam pectinesterase inhibitor domain 28 205 IPR006501 GO:0004857
Prci4g2383 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 59 208 IPR035513 -
Prci4g2383 572 Gene3D - 247 569 IPR012334 -
Prci4g2383 572 SMART PMEI_2 59 205 IPR006501 GO:0004857
Prci4g2383 572 FunFam Pectinesterase 247 570 - -
Prci4g2383 572 FunFam Probable pectinesterase/pectinesterase inhibitor 51 62 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2383 Prci-Chr4 36601175 36603895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2383 55 564 Carbohydrate Esterase AT5G09760 66.085 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2383 - - qsa:O6P43_023358 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2383 4 36601175 36603895 Prci4g2383 4 36601175 36603895 ECH